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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 3.3
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 4.4
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 10.0
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 58
Min RPKM: 2.1
Std RPKM: 9.1
Median RPKM: 12.7
GTEX-ZA64-1526-SM-5CVMD
58.0
GTEX-Y9LG-1426-SM-5IFJZ
46.6
GTEX-Y8LW-1626-SM-5IFHX
46.4
GTEX-ZZ64-1226-SM-5E43R
41.6
GTEX-S4UY-0726-SM-4AD6X
40.9
GTEX-ZF29-1926-SM-5S2P1
40.5
GTEX-11P82-1326-SM-5HL62
40.3
GTEX-ZTX8-1226-SM-4YCE9
38.1
GTEX-12BJ1-1826-SM-5HL9N
37.4
GTEX-XBED-1626-SM-47JYN
37.2
GTEX-ZLFU-2126-SM-4WWEV
35.2
GTEX-1211K-1926-SM-5EQLB
33.9
GTEX-XGQ4-0926-SM-4AT4U
33.0
GTEX-ZQUD-1926-SM-51MSA
31.8
GTEX-139T6-1626-SM-5PNYZ
31.3
GTEX-TMMY-0726-SM-33HBE
31.3
GTEX-145ME-1526-SM-5Q5F2
31.1
GTEX-T6MO-0326-SM-32QOK
31.1
GTEX-11ZTT-2326-SM-5EQLG
31.0
GTEX-WYJK-1326-SM-3NB2T
30.9
GTEX-117YX-1426-SM-5H12H
30.3
GTEX-U412-1826-SM-4DXTJ
30.1
GTEX-11LCK-2426-SM-5HL5F
28.3
GTEX-ZPIC-1126-SM-5BC7F
27.9
GTEX-YB5K-1626-SM-5IFIN
27.5
GTEX-13O61-1826-SM-5KM4I
27.3
GTEX-REY6-2426-SM-48FF5
27.0
GTEX-ZQG8-0726-SM-5P9H9
25.4
GTEX-YB5E-1726-SM-5IFJ3
25.3
GTEX-R55F-1726-SM-2TF4R
24.9
GTEX-13CF3-2126-SM-5IFJP
23.9
GTEX-13W3W-1226-SM-5LU4H
23.6
GTEX-ZV7C-1826-SM-5NQ83
23.5
GTEX-13FTX-1126-SM-5N9EN
22.9
GTEX-ZDTT-2126-SM-5S2OJ
22.8
GTEX-R55D-0826-SM-48FEA
22.3
GTEX-Y5LM-1726-SM-4VDSX
22.2
GTEX-1122O-1226-SM-5H113
22.1
GTEX-11DXZ-1926-SM-5GZZL
21.9
GTEX-145MN-1926-SM-5SIAI
21.9
GTEX-YFCO-1826-SM-4W1YH
21.9
GTEX-132Q8-1426-SM-5EGK7
21.0
GTEX-1399U-1826-SM-5PNZ1
20.9
GTEX-Y3I4-1526-SM-4TT7K
20.9
GTEX-RWS6-1926-SM-47JXY
20.5
GTEX-12KS4-0126-SM-5Q5A5
20.4
GTEX-12WSK-2226-SM-5GCO5
20.1
GTEX-PSDG-1626-SM-48TCQ
20.1
GTEX-WXYG-2226-SM-4E3IM
19.9
GTEX-UTHO-1026-SM-3GAF7
19.8
GTEX-YEC3-1026-SM-5IFI5
19.7
GTEX-13N1W-0626-SM-5MR4U
19.6
GTEX-14753-2426-SM-5LU8U
19.3
GTEX-Y5V6-2126-SM-4WWFX
19.3
GTEX-ZDYS-1126-SM-5K7UB
18.9
GTEX-QEL4-2126-SM-447AE
18.8
GTEX-S4Q7-1126-SM-4AD6R
18.8
GTEX-111YS-1926-SM-5GICC
18.6
GTEX-ZAB4-2526-SM-5HL8M
18.3
GTEX-ZU9S-1926-SM-5NQBP
18.3
GTEX-ZAJG-0626-SM-5HL8X
18.2
GTEX-XUJ4-1926-SM-4BOOV
18.0
GTEX-ZYW4-0826-SM-5GIDG
17.8
GTEX-WI4N-1426-SM-3LK7H
17.3
GTEX-WFON-1826-SM-3GILG
16.9
GTEX-S4P3-1326-SM-4AD6V
16.8
GTEX-ZXES-0826-SM-5E43C
16.5
GTEX-12WSN-1326-SM-5GCNT
16.3
GTEX-S341-1526-SM-4AD6K
16.3
GTEX-WYBS-0926-SM-3NM94
16.3
GTEX-QEG5-0726-SM-4R1JQ
16.2
GTEX-QMRM-1626-SM-4R1KV
15.9
GTEX-11I78-2226-SM-5PNYA
15.8
GTEX-13N11-1726-SM-5J1OJ
15.7
GTEX-147F4-2826-SM-5NQBN
15.7
GTEX-X4EP-2926-SM-3P5YQ
15.7
GTEX-11EM3-1326-SM-5N9C6
15.6
GTEX-ZT9W-2026-SM-51MRA
15.1
GTEX-X261-0626-SM-3NMD9
15.0
GTEX-13113-1726-SM-5GCOO
14.7
GTEX-13FTW-1426-SM-5LZWZ
14.7
GTEX-ZZPU-0626-SM-5E43T
14.7
GTEX-1313W-0826-SM-5EQ4T
14.6
GTEX-Y114-2026-SM-4TT7L
14.6
GTEX-UJHI-1426-SM-3DB9C
14.3
GTEX-XMD1-0826-SM-4AT52
14.2
GTEX-ZV6S-1826-SM-5NQ8D
14.2
GTEX-11WQK-2426-SM-5GU5C
14.1
GTEX-T2YK-2226-SM-32QPT
13.9
GTEX-X4XY-0926-SM-4E3JD
13.9
GTEX-XOT4-0726-SM-4GIAW
13.9
GTEX-XUW1-2326-SM-4BOO5
13.9
GTEX-U3ZN-1926-SM-4DXSG
13.7
GTEX-SE5C-2126-SM-4BRUJ
13.5
GTEX-ZVT4-1026-SM-57WC4
13.5
GTEX-11P7K-0726-SM-5EGKX
13.4
GTEX-W5X1-2326-SM-3GIL6
13.4
GTEX-1192X-2326-SM-5987X
13.2
GTEX-11EMC-2026-SM-5A5JV
13.1
GTEX-XQ8I-2426-SM-4WAXY
13.1
GTEX-12WSM-1726-SM-5BC6J
13.0
GTEX-S32W-2026-SM-4AD6E
13.0
GTEX-ZEX8-2226-SM-57WC6
13.0
GTEX-U3ZH-1426-SM-4DXSR
12.9
GTEX-13PVQ-1026-SM-5KM3M
12.8
GTEX-145MO-0826-SM-5NQBL
12.8
GTEX-14E6E-1326-SM-5S2NR
12.7
GTEX-QVJO-1826-SM-447C9
12.7
GTEX-ZF2S-2026-SM-5E461
12.7
GTEX-13O3P-0826-SM-5L3DH
12.4
GTEX-13NZ8-0126-SM-5IJCT
12.3
GTEX-ZF3C-2326-SM-5S2MZ
12.2
GTEX-TML8-1226-SM-32QON
12.1
GTEX-1117F-2826-SM-5GZXL
11.9
GTEX-139TU-0626-SM-5KM3X
11.9
GTEX-X15G-1626-SM-3NMB3
11.9
GTEX-117XS-1926-SM-5GICO
11.8
GTEX-ZYT6-0126-SM-5E45J
11.8
GTEX-T6MN-0726-SM-32PML
11.7
GTEX-131YS-0626-SM-5EGKL
11.6
GTEX-13D11-1026-SM-5IJFB
11.6
GTEX-13OW8-0226-SM-5K7UP
11.6
GTEX-WYVS-1726-SM-3NMAY
11.6
GTEX-QDT8-0626-SM-48TYW
11.5
GTEX-XV7Q-2326-SM-4BRVZ
11.5
GTEX-TKQ1-0226-SM-33HB5
11.4
GTEX-T5JC-2126-SM-32PMO
11.2
GTEX-ZYWO-2326-SM-5GZY4
11.2
GTEX-13OW5-2226-SM-5L3HC
11.1
GTEX-145LT-0726-SM-5S2VM
11.1
GTEX-12WSB-0626-SM-59HJO
11.0
GTEX-ZVE2-1226-SM-5NQ8R
11.0
GTEX-ZVT2-1826-SM-5NQ8W
11.0
GTEX-144GM-0926-SM-5O994
10.9
GTEX-YFC4-1426-SM-5IFJG
10.9
GTEX-ZLV1-1426-SM-4WWES
10.9
GTEX-11DXW-0626-SM-5N9ER
10.8
GTEX-WY7C-2726-SM-3NB3P
10.8
GTEX-ZY6K-1626-SM-5GZWV
10.8
GTEX-11GS4-2126-SM-5A5KR
10.7
GTEX-13FTY-2226-SM-5J1ND
10.7
GTEX-XMK1-1126-SM-4IHJ8
10.6
GTEX-11EQ9-1826-SM-5Q5AJ
10.3
GTEX-13FHO-0826-SM-5L3E8
10.3
GTEX-Y3IK-2326-SM-4WWDT
10.3
GTEX-11PRG-0826-SM-5EQ6A
10.1
GTEX-131XW-0726-SM-5EGK3
10.1
GTEX-Q2AG-0326-SM-48U1O
10.1
GTEX-R53T-1526-SM-48FEK
10.0
GTEX-ZDXO-0126-SM-5S2ND
10.0
GTEX-ZWKS-2826-SM-5NQ74
10.0
GTEX-11NV4-2026-SM-5N9DG
9.9
GTEX-132NY-0826-SM-5K7Y7
9.9
GTEX-13CF2-2026-SM-5K7VI
9.9
GTEX-WRHU-0326-SM-3MJFY
9.9
GTEX-11ONC-2126-SM-5HL6E
9.8
GTEX-13O3Q-2226-SM-5KM4O
9.8
GTEX-13QIC-2326-SM-5LU5N
9.8
GTEX-Y5V5-2126-SM-4WWFO
9.8
GTEX-R3RS-0626-SM-48FE1
9.6
GTEX-1269C-2426-SM-5FQSN
9.5
GTEX-133LE-1726-SM-5K7VQ
9.5
GTEX-ZVTK-0326-SM-51MRR
9.5
GTEX-ZUA1-1526-SM-59HLS
9.3
GTEX-11GSO-1926-SM-5A5K3
9.0
GTEX-RU72-0626-SM-46MUI
9.0
GTEX-13PL6-2926-SM-5L3I2
8.9
GTEX-146FH-0826-SM-5SI8T
8.8
GTEX-13W46-0826-SM-5LU3H
8.7
GTEX-144GL-2026-SM-5LU3O
8.7
GTEX-UPK5-2326-SM-3P5Z8
8.7
GTEX-1314G-1226-SM-5BC6D
8.6
GTEX-11NSD-0926-SM-5N9DR
8.5
GTEX-T2IS-1526-SM-32QPR
8.4
GTEX-XQ3S-1326-SM-4BOPQ
8.4
GTEX-11P81-1926-SM-5BC53
8.3
GTEX-12ZZX-1126-SM-5EGKB
8.2
GTEX-T5JW-2026-SM-4DM63
8.2
GTEX-Y111-2026-SM-4SOJA
8.2
GTEX-11OF3-1926-SM-59889
8.1
GTEX-13NZB-2126-SM-5MR4Y
7.9
GTEX-XMD2-0926-SM-4WWEF
7.9
GTEX-Y8E4-1626-SM-5S2MW
7.8
GTEX-11EI6-0626-SM-5985T
7.6
GTEX-TKQ2-1826-SM-33HB2
7.6
GTEX-VJWN-0726-SM-3GIJ8
7.6
GTEX-ZC5H-2626-SM-5J2MG
7.6
GTEX-ZYFC-0826-SM-5E44K
7.5
GTEX-YJ8O-2226-SM-5IFHW
7.4
GTEX-XUZC-1626-SM-4BRVP
7.3
GTEX-11O72-2126-SM-5N9FO
7.2
GTEX-132AR-0826-SM-5EGK6
7.2
GTEX-VUSG-2226-SM-4KKZO
7.2
GTEX-11WQC-1726-SM-5GU4W
6.9
GTEX-11ZUS-0826-SM-5FQUY
6.9
GTEX-139T8-0826-SM-5L3DE
6.9
GTEX-ZVZQ-0826-SM-51MRF
6.8
GTEX-11DXY-2326-SM-5GICW
6.7
GTEX-RUSQ-2026-SM-4GIAK
6.7
GTEX-S7SE-0826-SM-4AT4D
6.7
GTEX-WOFL-0826-SM-3MJG1
6.7
GTEX-ZTTD-1026-SM-51MRD
6.7
GTEX-SIU7-1626-SM-4BRUK
6.6
GTEX-13O3O-0826-SM-5K7WE
6.3
GTEX-13NZ9-1026-SM-5MR5K
6.2
GTEX-11DZ1-0326-SM-5N9BN
6.1
GTEX-11TT1-2126-SM-5GU5Y
6.0
GTEX-11TUW-1826-SM-5BC5D
4.0
GTEX-S33H-0326-SM-4AD6N
4.0
GTEX-14AS3-1626-SM-5S2OY
3.9
GTEX-XYKS-1326-SM-4BRUN
3.4
GTEX-U8XE-0826-SM-4E3J1
2.5
GTEX-13S86-1226-SM-5S2OA
2.2
GTEX-14ABY-2126-SM-5QGQZ
2.1
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.