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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 104807.3
Min RPKM: 0
Std RPKM: 22174.3
Median RPKM: 20557.3
GTEX-12WSG-2026-SM-5FQUU
104807.3
GTEX-ZPU1-1626-SM-4WWB2
101533.0
GTEX-ZAB4-1526-SM-5CVN7
100192.5
GTEX-11GSP-2126-SM-5HL5E
74391.9
GTEX-ZT9W-1526-SM-4YCDE
70532.0
GTEX-RM2N-0826-SM-48FD3
69691.5
GTEX-O5YW-1526-SM-3MJGL
66920.1
GTEX-PX3G-1526-SM-48U11
66755.3
GTEX-ZVZP-1726-SM-5GZWY
66525.1
GTEX-OXRK-1626-SM-3NB17
62938.7
GTEX-ZVT2-1626-SM-51MRC
62165.5
GTEX-YFCO-0826-SM-5LUAG
61582.5
GTEX-ZZ64-0426-SM-5E43F
60220.8
GTEX-13OW6-2526-SM-5IJEC
59042.4
GTEX-12696-1726-SM-5EQLH
58702.0
GTEX-117YW-2226-SM-5N9DB
58205.1
GTEX-WRHK-0626-SM-4MVOE
58192.8
GTEX-Q734-1026-SM-48U16
58156.6
GTEX-111CU-0926-SM-5EGIK
57502.4
GTEX-1399R-1126-SM-5IFIO
56014.2
GTEX-QV44-1226-SM-4R1KE
55725.5
GTEX-U3ZN-2026-SM-4DXUC
54145.7
GTEX-11NSD-1426-SM-5HL67
54094.2
GTEX-14BMU-1126-SM-5RQJ8
53282.5
GTEX-Q2AI-0826-SM-48TZO
52258.9
GTEX-QLQW-0726-SM-447AA
49738.5
GTEX-UJMC-1226-SM-4IHLI
49563.8
GTEX-PWCY-0926-SM-48TD7
47947.4
GTEX-ZDYS-1926-SM-5HL59
46947.4
GTEX-ZP4G-1226-SM-4WWCJ
46813.2
GTEX-V955-1326-SM-4JBHR
45855.9
GTEX-W5WG-1726-SM-4LMI5
45075.2
GTEX-WEY5-1226-SM-4LMIQ
45038.4
GTEX-YJ8A-1526-SM-5P9FT
44595.4
GTEX-PWN1-1526-SM-48TDA
44131.9
GTEX-WFG7-1326-SM-4LMK1
42936.6
GTEX-13FTW-1726-SM-5KM2B
42739.9
GTEX-X15G-1126-SM-4PQZG
42715.5
GTEX-Y5LM-1326-SM-5RQIS
42486.3
GTEX-13O21-0926-SM-5IFGT
42427.3
GTEX-QLQ7-0826-SM-447B3
41774.2
GTEX-WHWD-1426-SM-4OORU
41285.7
GTEX-139YR-1926-SM-5LZXM
40133.8
GTEX-13QBU-1126-SM-5LU44
39939.6
GTEX-XUJ4-1226-SM-4BOPD
39699.4
GTEX-SUCS-0926-SM-4DM4Z
38242.4
GTEX-111YS-1126-SM-5GZYQ
38150.4
GTEX-PW2O-1226-SM-48TCH
36918.1
GTEX-1122O-1926-SM-5EGIQ
36621.1
GTEX-13D11-2126-SM-5IFH2
36619.3
GTEX-ZV7C-1626-SM-5NQ7E
36571.0
GTEX-ZYFG-1326-SM-5GICJ
35660.5
GTEX-R53T-1226-SM-48FCT
35521.3
GTEX-144GN-1226-SM-5O991
34956.0
GTEX-131XG-1226-SM-5EGH9
34912.8
GTEX-13CF3-1926-SM-5K7WF
34822.7
GTEX-QV31-0626-SM-447C5
33891.1
GTEX-ZQUD-0826-SM-57WDQ
33665.8
GTEX-S3XE-1026-SM-4AD4O
33332.8
GTEX-145LT-1426-SM-5O9B3
33102.3
GTEX-S4Q7-0726-SM-4AD5F
33005.3
GTEX-145MN-1326-SM-5NQ9S
32921.7
GTEX-12BJ1-1726-SM-5HL9B
32765.7
GTEX-SNOS-0826-SM-4DM5N
32732.8
GTEX-PWOO-1226-SM-48TCO
32528.4
GTEX-13FTX-0726-SM-5N9BI
32065.7
GTEX-ZLFU-1326-SM-4WWET
31417.3
GTEX-XBED-1226-SM-4AT5V
31006.6
GTEX-XUZC-0726-SM-4BOPH
30966.8
GTEX-12WSK-1426-SM-5CVNN
30569.8
GTEX-131XF-1226-SM-5HL8V
30368.8
GTEX-Y5V6-1326-SM-4VDTF
30328.2
GTEX-ZA64-0826-SM-5HL9U
30031.9
GTEX-133LE-1326-SM-5IFGO
29867.3
GTEX-SNMC-0626-SM-4DM6H
29538.6
GTEX-OOBJ-1526-SM-3NB1Q
28868.3
GTEX-XXEK-0826-SM-4BRWG
28828.5
GTEX-QMRM-1126-SM-447BN
28602.2
GTEX-11TT1-0726-SM-5GU5A
27641.4
GTEX-P4PP-1526-SM-3P61M
26697.1
GTEX-QXCU-1926-SM-48FE4
26611.6
GTEX-11I78-1726-SM-5A5M3
26234.4
GTEX-Q2AH-1126-SM-48TZM
26056.8
GTEX-U4B1-1026-SM-4DXT1
25436.7
GTEX-144GM-1726-SM-5O9AS
24907.1
GTEX-NFK9-1526-SM-3LK7B
24734.1
GTEX-T5JW-0926-SM-4DM5K
24691.5
GTEX-ZY6K-0726-SM-5A5L8
24677.8
GTEX-13FH7-1026-SM-5IJGF
24604.4
GTEX-QDVJ-1426-SM-48U1Y
23962.7
GTEX-TMMY-1626-SM-4DXTY
23520.4
GTEX-ZZPU-1426-SM-5GZZ6
23162.2
GTEX-T6MO-0726-SM-4DM58
22299.7
GTEX-YEC4-1426-SM-5IFHS
22054.5
GTEX-132QS-1826-SM-5IFFN
21791.1
GTEX-13U4I-2526-SM-5SI8Z
21387.2
GTEX-P78B-1826-SM-3P5YX
20557.3
GTEX-Y3I4-1626-SM-4TT7W
19953.9
GTEX-S95S-0826-SM-4B64N
19915.8
GTEX-RWS6-0926-SM-47JXE
19597.4
GTEX-QDVN-1226-SM-48TZ5
19181.7
GTEX-XQ8I-2026-SM-4BOOL
19078.5
GTEX-11EM3-1026-SM-5A5KL
17806.1
GTEX-OHPK-1526-SM-3MJGM
17349.1
GTEX-Y8LW-0826-SM-4WWDO
17265.1
GTEX-145MO-2226-SM-5Q5BN
17051.3
GTEX-117YX-1026-SM-5H11V
17012.2
GTEX-V1D1-1726-SM-4JBHB
16968.9
GTEX-ZF2S-1426-SM-57WET
16346.1
GTEX-S341-0626-SM-4AD5T
16274.3
GTEX-S4UY-1626-SM-4AD55
16257.7
GTEX-139D8-2326-SM-5IFGE
15803.5
GTEX-11DXX-1326-SM-5GIDZ
15249.1
GTEX-WFON-1126-SM-4LVMA
14963.6
GTEX-ZVT3-2126-SM-59HL2
14826.5
GTEX-ZXES-1426-SM-5NQ8S
14741.9
GTEX-Y9LG-1026-SM-5IFJN
13814.5
GTEX-132AR-2426-SM-5IFFD
13600.1
GTEX-QCQG-0526-SM-48U2A
13144.8
GTEX-POMQ-0826-SM-3P61H
13035.7
GTEX-12WSD-2326-SM-59HKQ
12980.8
GTEX-13113-0726-SM-5LZUF
12823.1
GTEX-T8EM-1226-SM-4DM5J
12816.0
GTEX-Y3IK-1426-SM-4YCES
12515.7
GTEX-ZYY3-1726-SM-5EGH3
11745.6
GTEX-Y8E4-1526-SM-4WWDI
11538.3
GTEX-WFG8-1326-SM-4LVN3
11508.8
GTEX-ZLV1-0826-SM-4WWEQ
10804.6
GTEX-1399S-1626-SM-5P9GI
10800.1
GTEX-WZTO-2126-SM-4PQYW
10559.7
GTEX-ZVP2-1626-SM-5GU5D
10482.4
GTEX-VJYA-1026-SM-4KL21
10225.7
GTEX-13RTK-0226-SM-5RQHR
10044.7
GTEX-XBEW-1826-SM-4RTWX
10029.5
GTEX-XV7Q-1326-SM-4BRWM
9708.7
GTEX-145ME-1026-SM-5O9B4
9456.8
GTEX-13PVQ-2126-SM-5L3FW
8447.1
GTEX-13S7M-1826-SM-5RQK6
6968.1
GTEX-RTLS-2626-SM-46MUJ
5230.6
GTEX-WHPG-0426-SM-4M1XW
4920.4
GTEX-11NUK-2426-SM-5BC4U
4317.2
GTEX-14BMV-2226-SM-5RQHX
4098.9
GTEX-11EI6-2426-SM-5PNVS
3548.8
GTEX-SIU7-1426-SM-4BRWT
3050.8
GTEX-146FH-2126-SM-5SI9U
2291.6
GTEX-T5JC-1926-SM-4DM6Q
2068.3
GTEX-S7SF-0626-SM-4AD4V
1382.8
GTEX-U8T8-1226-SM-4E3IH
1332.2
GTEX-1211K-1426-SM-5FQTF
482.7
GTEX-11EQ9-1226-SM-5987E
308.3
GTEX-ZYVF-2726-SM-5GID4
217.4
GTEX-13QJ3-2726-SM-5SI6L
88.9
GTEX-UPK5-2126-SM-4JBJK
87.8
GTEX-13O3Q-2126-SM-5KM4C
68.7
GTEX-P4QT-1526-SM-3NMCT
47.5
GTEX-12C56-0526-SM-5FQST
21.0
GTEX-R55D-1526-SM-48FEJ
20.6
GTEX-PLZ6-0826-SM-3P61K
18.5
GTEX-13N1W-2026-SM-5K7YU
17.2
GTEX-TKQ1-0526-SM-4DXTG
16.1
GTEX-WH7G-1526-SM-4LVMX
12.6
GTEX-1399U-1626-SM-5P9J3
9.6
GTEX-11P7K-1726-SM-5GU6F
8.8
GTEX-R55C-1026-SM-48FCM
7.9
GTEX-P4PQ-1526-SM-3NMCK
7.6
GTEX-R55G-1126-SM-48FDG
6.5
GTEX-11P82-0726-SM-5PNYL
5.3
GTEX-13O61-1126-SM-5L3FI
5.2
GTEX-XAJ8-0326-SM-47JYI
5.1
GTEX-13OVI-2426-SM-5KM4J
4.7
GTEX-TKQ2-0926-SM-4DXU5
4.7
GTEX-XPVG-1526-SM-4B66C
3.9
GTEX-131XE-2226-SM-5PNYX
3.3
GTEX-OIZH-1526-SM-3NB1J
3.2
GTEX-12WSJ-0926-SM-5P9JD
2.8
GTEX-146FR-2026-SM-5NQAI
2.8
GTEX-S4P3-0726-SM-4AD57
2.8
GTEX-Y114-1226-SM-4TT88
2.6
GTEX-S4Z8-1226-SM-4AD6W
1.5
GTEX-UJHI-1026-SM-4IHJP
1.5
GTEX-ZV6S-0926-SM-57WGB
1.5
GTEX-ZTX8-0426-SM-59HLG
1.2
GTEX-UPIC-1826-SM-4IHKC
1.0
GTEX-WFJO-1126-SM-4LVLZ
0.9
GTEX-ZE7O-3026-SM-51MS4
0.7
GTEX-ZPIC-2026-SM-57WG3
0.5
GTEX-13X6H-1626-SM-5Q5CT
0.4
GTEX-13111-1226-SM-5GCNC
0.2
GTEX-YEC3-1426-101806-SM-5PNXX
0.2
GTEX-11WQK-2626-SM-5EQ4K
0.1
GTEX-1339X-1426-SM-5K7YO
0.1
GTEX-RU1J-0526-SM-46MUT
0.1
GTEX-11VI4-0326-SM-5EQ6L
0.0
Show all
STOMACH - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.