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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 15.1
Min RPKM: 5.6
Std RPKM: 1.9
Median RPKM: 10.1
GTEX-13FTW-2026-SM-5IJE2
15.1
GTEX-WFG8-1626-SM-4LVMB
14.5
GTEX-145LT-1026-SM-5LU9O
14.0
GTEX-XGQ4-1326-SM-4GIDU
13.8
GTEX-ZVT2-2126-SM-5NQ93
13.3
GTEX-ZA64-1226-SM-5HL7B
13.1
GTEX-YB5E-1526-SM-5IFIE
13.0
GTEX-ZVP2-1726-SM-5GU5P
12.9
GTEX-ZYWO-1526-SM-5SIAL
12.7
GTEX-133LE-1426-SM-5IFH1
12.5
GTEX-Z9EW-0926-SM-5CVMM
12.2
GTEX-ZTX8-0526-SM-59HLD
12.2
GTEX-ZVZP-1826-SM-5GZXB
12.2
GTEX-11EQ9-1326-SM-5985X
12.1
GTEX-ZYFG-2026-SM-5E43Y
12.1
GTEX-ZPCL-1726-SM-57WEO
12.1
GTEX-XUZC-1426-SM-4BRV3
12.1
GTEX-ZZ64-0526-SM-5GZXM
11.8
GTEX-11DXX-1626-SM-5H11H
11.8
GTEX-XAJ8-0526-SM-47JYK
11.6
GTEX-11NSD-1726-SM-5N9C3
11.6
GTEX-1399U-2126-SM-5IFEZ
11.6
GTEX-14DAR-1426-SM-5RQIR
11.6
GTEX-11P82-0826-SM-5P9GU
11.6
GTEX-14E6E-1626-SM-5RQI7
11.4
GTEX-ZXES-1526-SM-5NQ95
11.3
GTEX-131XG-1726-SM-5LZUR
11.0
GTEX-UPK5-2026-SM-4JBIM
11.0
GTEX-ZLV1-1126-SM-4WWBW
11.0
GTEX-131XF-1326-SM-5GCMQ
11.0
GTEX-1122O-1326-SM-5H11F
10.9
GTEX-12BJ1-1926-SM-5HL9Z
10.8
GTEX-1399S-2026-SM-5KM4B
10.8
GTEX-13D11-0726-SM-5LZZB
10.7
GTEX-Y9LG-1626-SM-5IFHM
10.5
GTEX-ZEX8-1826-SM-57WBH
10.5
GTEX-Y5LM-1626-SM-4VDTB
10.4
GTEX-YEC4-1726-SM-4W21E
10.4
GTEX-13RTK-0826-SM-5Q5C6
10.4
GTEX-13PL7-2626-SM-5IFH4
10.4
GTEX-ZPIC-2326-SM-57WDW
10.4
GTEX-ZP4G-1626-SM-57WGD
10.3
GTEX-139YR-2226-SM-5IFFW
10.2
GTEX-XBED-1426-SM-4AT4G
10.2
GTEX-11XUK-1426-SM-5EQMG
10.1
GTEX-13FH7-1226-SM-5IJFK
10.1
GTEX-11I78-1126-SM-5A5K5
10.1
GTEX-1399R-2026-SM-5K7WN
10.1
GTEX-WFJO-0926-SM-4LVM2
10.1
GTEX-ZTSS-0926-SM-59865
10.0
GTEX-YF7O-1826-SM-5IFIU
10.0
GTEX-11P7K-1626-SM-5GU63
10.0
GTEX-11VI4-1626-SM-5EQKO
9.9
GTEX-XXEK-1026-SM-4BRUW
9.9
GTEX-139T6-1026-SM-5IJGC
9.8
GTEX-WRHK-1026-SM-4MVOD
9.7
GTEX-13O61-1326-SM-5KM31
9.7
GTEX-X15G-1426-SM-4PQZK
9.6
GTEX-111YS-1426-SM-5GID8
9.5
GTEX-X5EB-1626-SM-4E3IV
9.5
GTEX-ZTPG-2626-SM-57WFX
9.4
GTEX-Y3IK-1726-SM-4YCCR
9.3
GTEX-111CU-1326-SM-5NQ8L
9.3
GTEX-ZLFU-1526-SM-4WWBT
9.3
GTEX-13CF3-1226-SM-5LZXN
9.0
GTEX-WQUQ-2426-SM-4MVNW
9.0
GTEX-13113-1226-SM-5EGHT
8.9
GTEX-148VJ-2226-SM-5NQ9M
8.8
GTEX-WH7G-1626-SM-4LVMY
8.6
GTEX-11DXZ-1326-SM-5H11X
8.6
GTEX-13111-1426-SM-5DUW3
8.6
GTEX-ZQG8-2526-SM-57WEQ
8.4
GTEX-VJYA-0926-SM-4KL1N
8.3
GTEX-13QBU-1926-SM-5IJEW
8.3
GTEX-Y114-1426-SM-4TT6W
8.2
GTEX-WFG7-1726-SM-4LVME
8.2
GTEX-WEY5-1526-SM-4LMJF
8.0
GTEX-13O21-1026-SM-5IJDU
7.9
GTEX-145ME-0926-SM-5O9AR
7.8
GTEX-VUSG-1726-SM-4KKZL
7.8
GTEX-117YX-0326-SM-5GICL
7.3
GTEX-12WSK-1526-SM-5CVNO
7.1
GTEX-ZC5H-2326-SM-4WAYT
6.7
GTEX-ZQUD-0926-SM-57WE3
6.6
GTEX-13OVI-1926-SM-5IJCG
6.2
GTEX-1192X-2526-SM-59868
6.2
GTEX-ZF2S-1726-SM-57WFT
5.8
GTEX-XMK1-1826-SM-4B66F
5.6
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.