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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 30.9
Min RPKM: 13.6
Std RPKM: 3.2
Median RPKM: 22.1
GTEX-146FH-2526-SM-5Q5BP
30.9
GTEX-132AR-1426-SM-5IFF1
30.4
GTEX-WI4N-2526-SM-4OOSE
29.5
GTEX-X4EO-2426-SM-4QASD
28.9
GTEX-11ZTS-1926-SM-5CVLA
28.5
GTEX-11GSP-0226-SM-5A5KV
28.3
GTEX-ZAJG-2726-SM-5S2MU
28.3
GTEX-13OVJ-2426-SM-5KM3I
28.2
GTEX-XV7Q-1426-SM-4BRWA
28.0
GTEX-133LE-1226-SM-5IFGC
27.9
GTEX-13W3W-1526-SM-5LU5I
26.4
GTEX-13QIC-1526-SM-5IJFL
26.3
GTEX-Q734-0726-SM-48TZP
25.7
GTEX-139D8-2426-SM-5KM3A
25.6
GTEX-12WSG-1426-SM-5FQUK
25.6
GTEX-P4QT-2426-SM-3NMCL
25.5
GTEX-11EM3-1726-SM-5N9D1
25.4
GTEX-W5WG-0926-SM-4RTX9
25.3
GTEX-P78B-1926-SM-3P616
24.9
GTEX-ZYY3-2726-SM-5EGH4
24.9
GTEX-ZC5H-2026-SM-5CVN2
24.3
GTEX-13O3O-2726-SM-5KM35
24.3
GTEX-TML8-0926-SM-4DXSJ
24.1
GTEX-13FTX-0926-SM-5IFF7
24.1
GTEX-ZPIC-1426-SM-4WWCP
24.1
GTEX-S7SF-1326-SM-4AD4P
23.9
GTEX-S32W-1226-SM-4AD67
23.8
GTEX-RU72-2226-SM-46MUE
23.8
GTEX-T2IS-2026-SM-4DM6W
23.7
GTEX-11DXX-1426-SM-5GIDU
23.6
GTEX-ZZPU-2126-SM-5EGIU
23.1
GTEX-13N11-0526-SM-5IJFI
23.0
GTEX-11EMC-1726-SM-5H11P
22.9
GTEX-12WSD-2726-SM-59HLR
22.9
GTEX-QVJO-3126-SM-4R1KC
22.8
GTEX-1269C-1826-SM-5N9E1
22.8
GTEX-Y3IK-2026-SM-4YCDG
22.8
GTEX-QCQG-1426-SM-48U22
22.7
GTEX-TSE9-2226-SM-4DXUR
22.6
GTEX-13U4I-2126-SM-5LU55
22.6
GTEX-12WSJ-1226-SM-5LU91
22.6
GTEX-YFC4-2726-SM-5IFJW
22.5
GTEX-X8HC-2726-SM-46MUA
22.4
GTEX-14AS3-1326-SM-5RQJE
22.3
GTEX-RU1J-0826-SM-46MUU
22.3
GTEX-X15G-1726-SM-4PQZN
22.2
GTEX-1399S-2126-SM-5J2MH
22.2
GTEX-11P81-1526-SM-5P9GS
22.1
GTEX-PWCY-1326-SM-48TCU
22.1
GTEX-13PL7-2326-SM-5L3FY
22.1
GTEX-YJ8O-1026-SM-5CVM5
22.0
GTEX-12WSB-2226-SM-5GCOS
22.0
GTEX-13QBU-1526-SM-5LU3W
22.0
GTEX-OHPK-2426-SM-3MJGH
21.9
GTEX-XYKS-1726-SM-4E3IO
21.8
GTEX-U3ZN-1026-SM-4DXTC
21.8
GTEX-TMMY-1726-SM-4DXTD
21.8
GTEX-ZLWG-0926-SM-4WWC3
21.7
GTEX-131YS-2226-SM-5P9G8
21.6
GTEX-ZYFG-1726-SM-5GZZB
21.6
GTEX-RWS6-1026-SM-47JXD
21.5
GTEX-XUJ4-1326-SM-4BOQ9
21.5
GTEX-11ZVC-1426-SM-5EGGA
21.4
GTEX-XMD3-2326-SM-4AT5H
21.4
GTEX-Y114-1726-SM-4TT7U
21.4
GTEX-13VXT-1526-SM-5LU3J
21.4
GTEX-POMQ-1426-SM-3P61D
21.3
GTEX-ZYWO-1926-SM-5E456
21.2
GTEX-ZVT3-2626-SM-5GU5L
21.1
GTEX-11XUK-1626-SM-5GU5O
20.9
GTEX-145ME-1226-SM-5SIB6
20.8
GTEX-T6MO-1126-SM-4DM5D
20.7
GTEX-1313W-2726-SM-5P9IX
20.5
GTEX-P4PP-2426-SM-3P61L
20.4
GTEX-13PVR-1226-SM-5RQJ2
20.3
GTEX-PLZ4-2826-SM-3P617
20.3
GTEX-PX3G-2426-SM-48TZZ
20.2
GTEX-WWYW-2726-SM-4MVOP
20.1
GTEX-13D11-1126-SM-5KLYS
20.0
GTEX-11VI4-1026-SM-5EQM1
19.7
GTEX-RTLS-2326-SM-46MUH
19.6
GTEX-11ZTT-1826-SM-5CVLN
19.6
GTEX-12WSK-1926-SM-5LZVK
19.1
GTEX-S341-0726-SM-4AD5R
19.1
GTEX-12ZZX-2026-SM-5LZV9
18.9
GTEX-11I78-1926-SM-59878
18.9
GTEX-13X6H-1026-SM-5SIBE
18.8
GTEX-PWN1-2426-SM-48TDD
18.4
GTEX-ZVT2-0326-SM-5E44G
18.4
GTEX-T5JW-0426-SM-4DM7M
17.9
GTEX-ZP4G-0626-SM-4WWF1
17.4
GTEX-S4P3-0926-SM-4AD54
17.3
GTEX-XUZC-1026-SM-4BOPY
17.1
GTEX-XUW1-0126-SM-4BOOQ
16.8
GTEX-13OVI-0726-SM-5L3DD
16.2
GTEX-OHPL-2426-SM-48TDN
14.6
GTEX-UJHI-1226-SM-4IHLR
13.6
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OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.