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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 426
Min RPKM: 52.4
Std RPKM: 73.7
Median RPKM: 206.5
GTEX-13OVI-0726-SM-5L3DD
426.0
GTEX-ZLWG-0926-SM-4WWC3
356.8
GTEX-11ZTS-1926-SM-5CVLA
340.5
GTEX-133LE-1226-SM-5IFGC
333.1
GTEX-X8HC-2726-SM-46MUA
327.1
GTEX-12WSD-2726-SM-59HLR
321.9
GTEX-S341-0726-SM-4AD5R
318.9
GTEX-ZZPU-2126-SM-5EGIU
310.7
GTEX-ZYY3-2726-SM-5EGH4
308.7
GTEX-13N11-0526-SM-5IJFI
298.7
GTEX-ZYFG-1726-SM-5GZZB
296.4
GTEX-XUW1-0126-SM-4BOOQ
291.4
GTEX-ZYWO-1926-SM-5E456
287.6
GTEX-1269C-1826-SM-5N9E1
286.3
GTEX-P78B-1926-SM-3P616
285.2
GTEX-11ZVC-1426-SM-5EGGA
281.2
GTEX-XUJ4-1326-SM-4BOQ9
279.9
GTEX-ZPIC-1426-SM-4WWCP
268.7
GTEX-ZVT3-2626-SM-5GU5L
267.0
GTEX-S32W-1226-SM-4AD67
264.6
GTEX-13PL7-2326-SM-5L3FY
263.7
GTEX-RWS6-1026-SM-47JXD
263.2
GTEX-145ME-1226-SM-5SIB6
263.2
GTEX-13X6H-1026-SM-5SIBE
261.5
GTEX-WWYW-2726-SM-4MVOP
256.3
GTEX-XMD3-2326-SM-4AT5H
252.8
GTEX-RU72-2226-SM-46MUE
251.6
GTEX-13FTX-0926-SM-5IFF7
248.9
GTEX-QVJO-3126-SM-4R1KC
246.9
GTEX-139D8-2426-SM-5KM3A
245.2
GTEX-ZVT2-0326-SM-5E44G
244.6
GTEX-YFC4-2726-SM-5IFJW
244.4
GTEX-S4P3-0926-SM-4AD54
243.5
GTEX-TSE9-2226-SM-4DXUR
240.1
GTEX-Y3IK-2026-SM-4YCDG
240.1
GTEX-Y114-1726-SM-4TT7U
237.9
GTEX-1313W-2726-SM-5P9IX
234.2
GTEX-11VI4-1026-SM-5EQM1
228.8
GTEX-11I78-1926-SM-59878
228.2
GTEX-XV7Q-1426-SM-4BRWA
219.6
GTEX-13QIC-1526-SM-5IJFL
215.2
GTEX-11P81-1526-SM-5P9GS
214.0
GTEX-13O3O-2726-SM-5KM35
212.8
GTEX-XYKS-1726-SM-4E3IO
212.4
GTEX-11EM3-1726-SM-5N9D1
212.0
GTEX-11GSP-0226-SM-5A5KV
210.0
GTEX-P4PP-2426-SM-3P61L
210.0
GTEX-12ZZX-2026-SM-5LZV9
209.1
GTEX-PX3G-2426-SM-48TZZ
206.5
GTEX-W5WG-0926-SM-4RTX9
200.3
GTEX-13OVJ-2426-SM-5KM3I
199.8
GTEX-12WSK-1926-SM-5LZVK
198.4
GTEX-P4QT-2426-SM-3NMCL
195.7
GTEX-OHPK-2426-SM-3MJGH
195.1
GTEX-QCQG-1426-SM-48U22
194.5
GTEX-12WSB-2226-SM-5GCOS
190.8
GTEX-X15G-1726-SM-4PQZN
189.8
GTEX-UJHI-1226-SM-4IHLR
186.9
GTEX-RTLS-2326-SM-46MUH
183.8
GTEX-11DXX-1426-SM-5GIDU
182.7
GTEX-11XUK-1626-SM-5GU5O
178.5
GTEX-12WSJ-1226-SM-5LU91
178.4
GTEX-14AS3-1326-SM-5RQJE
177.7
GTEX-ZP4G-0626-SM-4WWF1
175.7
GTEX-POMQ-1426-SM-3P61D
174.5
GTEX-U3ZN-1026-SM-4DXTC
171.2
GTEX-YJ8O-1026-SM-5CVM5
168.5
GTEX-TML8-0926-SM-4DXSJ
167.8
GTEX-XUZC-1026-SM-4BOPY
164.5
GTEX-PWN1-2426-SM-48TDD
163.1
GTEX-13W3W-1526-SM-5LU5I
158.4
GTEX-PWCY-1326-SM-48TCU
158.0
GTEX-X4EO-2426-SM-4QASD
157.2
GTEX-T2IS-2026-SM-4DM6W
156.6
GTEX-RU1J-0826-SM-46MUU
149.5
GTEX-131YS-2226-SM-5P9G8
141.2
GTEX-T5JW-0426-SM-4DM7M
140.3
GTEX-PLZ4-2826-SM-3P617
138.6
GTEX-12WSG-1426-SM-5FQUK
136.7
GTEX-Q734-0726-SM-48TZP
133.4
GTEX-13VXT-1526-SM-5LU3J
130.9
GTEX-TMMY-1726-SM-4DXTD
130.7
GTEX-11EMC-1726-SM-5H11P
128.8
GTEX-13U4I-2126-SM-5LU55
128.5
GTEX-132AR-1426-SM-5IFF1
125.1
GTEX-11ZTT-1826-SM-5CVLN
124.0
GTEX-13QBU-1526-SM-5LU3W
120.9
GTEX-146FH-2526-SM-5Q5BP
110.4
GTEX-ZAJG-2726-SM-5S2MU
107.0
GTEX-S7SF-1326-SM-4AD4P
91.7
GTEX-WI4N-2526-SM-4OOSE
86.6
GTEX-1399S-2126-SM-5J2MH
85.2
GTEX-T6MO-1126-SM-4DM5D
70.8
GTEX-ZC5H-2026-SM-5CVN2
67.0
GTEX-OHPL-2426-SM-48TDN
61.5
GTEX-13D11-1126-SM-5KLYS
55.6
GTEX-13PVR-1226-SM-5RQJ2
52.4
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OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.