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KIAA1257
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TISSUE ATLAS PRIMARY DATA VAGINA

GENE/PROTEIN

Antibody validation


Dictionary

Vagina

VAGINA - Expression summary

RNA expressioni

RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.

Read more

GTEx:0.0RPKM
FANTOM5:0.0Tags Per Million

VAGINA - Annotated protein expressioni

The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.

Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.

The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.

For histological reference, view the histological dictionary.

 

Antibody stainingi

This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.

Read more

Antibody HPA042811

 

Antibody HPA048445

 

Squamous epithelial cells

Medium   Low  
   
   

VAGINA - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Read more

Pending HPA RNA-seq analysis


VAGINA - GTEx RNA-seqi

RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.

Read more

Average RPKM

0.0

GTEx sample id

RPKM

 

Vagina

Vagina
RPKM: 0.0
Samples: 96

Max RPKM: 0.2
Min RPKM: 0
Std RPKM: 0
Median RPKM: 0
GTEX-ZVT3-2726-SM-5GU5X 0.2
GTEX-131YS-2426-SM-5J2OD 0.2
GTEX-PLZ4-2726-SM-3P61A 0.2
GTEX-WRHU-2926-SM-4MVNQ 0.2
GTEX-NL3G-2526-SM-4SOIE 0.1
GTEX-YFC4-2926-SM-5IFJ8 0.1
GTEX-Y8LW-1426-SM-5RQJJ 0.1
GTEX-13QIC-1826-SM-5J1MY 0.1
GTEX-146FR-2426-SM-5NQAU 0.1
GTEX-147F3-1526-SM-5SIAK 0.1
GTEX-XUJ4-1626-SM-4BONV 0.1
GTEX-14BMU-1926-SM-5S2QC 0.1
GTEX-X15G-1926-SM-4PQZQ 0.1
GTEX-13U4I-2026-SM-5LU3L 0.1
GTEX-WEY5-0826-SM-4LMIH 0.1
GTEX-UJHI-1326-SM-4IHJO 0.1
GTEX-TMMY-1926-SM-4DXUU 0.1
GTEX-QDT8-2526-SM-48TYX 0.1
GTEX-QVJO-2526-SM-4R1KB 0.1
GTEX-SE5C-1126-SM-4BRWZ 0.1
GTEX-S7SF-1426-SM-4AT5A 0.1
GTEX-S4UY-1326-SM-4AD4X 0.1
GTEX-13N11-1526-SM-5L3FL 0.1
GTEX-ZYY3-2626-SM-5N9DH 0.1
GTEX-11XUK-1326-SM-5EQM4 0.1
GTEX-ZYVF-0326-SM-5GIES 0.1
GTEX-ZTPG-2226-SM-57WF9 0.1
GTEX-ZV6S-1326-SM-59HJA 0.1
GTEX-12WSJ-1326-SM-5GCOB 0.1
GTEX-12ZZX-1926-SM-5EGKC 0.1
GTEX-UPIC-1426-SM-4IHLQ 0.0
GTEX-ZZPU-2226-SM-5EGIV 0.0
GTEX-U3ZN-0926-SM-4DXTU 0.0
GTEX-TSE9-2526-SM-4DXUS 0.0
GTEX-ZVT2-0626-SM-5GICR 0.0
GTEX-TML8-1126-SM-4DXSS 0.0
GTEX-T6MO-1226-SM-4DM5S 0.0
GTEX-T2IS-1926-SM-4DM74 0.0
GTEX-ZXES-0626-SM-5E45P 0.0
GTEX-ZYWO-2026-SM-5GIDA 0.0
GTEX-YJ8O-1226-SM-5P9JE 0.0
GTEX-W5WG-1026-SM-4LMIF 0.0
GTEX-ZQG8-1126-SM-51MRL 0.0
GTEX-ZP4G-0826-SM-4WWF3 0.0
GTEX-X8HC-2826-SM-46MWJ 0.0
GTEX-ZLWG-1126-SM-4WWFQ 0.0
GTEX-ZGAY-2226-SM-4YCCX 0.0
GTEX-ZE7O-2426-SM-57WD7 0.0
GTEX-XUW1-0326-SM-4BOOR 0.0
GTEX-XV7Q-1626-SM-4BRWC 0.0
GTEX-Y114-1926-SM-4TT8J 0.0
GTEX-Q734-1426-SM-48TZQ 0.0
GTEX-ZC5H-2226-SM-4WAWS 0.0
GTEX-Y3IK-2226-SM-4YCD4 0.0
GTEX-ZAJG-2926-SM-5HL8P 0.0
GTEX-12WSB-2426-SM-5EGJC 0.0
GTEX-13QBU-1726-SM-5IJFQ 0.0
GTEX-13PVR-1426-SM-5S2PW 0.0
GTEX-13PL7-2726-SM-5L3GB 0.0
GTEX-13OVI-0926-SM-5J1MI 0.0
GTEX-13D11-1326-SM-5IJFY 0.0
GTEX-1399U-1526-SM-5J2N7 0.0
GTEX-1399S-2326-SM-5K7YV 0.0
GTEX-132AR-1626-SM-5EGHP 0.0
GTEX-131XG-2126-SM-5DUXG 0.0
GTEX-12WSD-2926-SM-5LZUH 0.0
GTEX-13W3W-2326-SM-5LU4Y 0.0
GTEX-11VI4-0726-SM-5GU5B 0.0
GTEX-11TTK-2726-SM-5GU58 0.0
GTEX-11P81-2126-SM-5HL6N 0.0
GTEX-11I78-2026-SM-5987C 0.0
GTEX-11GSP-2226-SM-5HL5Q 0.0
GTEX-11EMC-1926-SM-5A5JU 0.0
GTEX-11EM3-1826-SM-5A5KO 0.0
GTEX-11DXX-1726-SM-5H11T 0.0
GTEX-113JC-1926-SM-5N9GE 0.0
GTEX-P78B-2226-SM-3P5ZZ 0.0
GTEX-S341-1226-SM-4AD5S 0.0
GTEX-RWS6-1726-SM-47JXP 0.0
GTEX-RU1J-1426-SM-46MUV 0.0
GTEX-QCQG-1226-SM-48U23 0.0
GTEX-1117F-2526-SM-5GZY6 0.0
GTEX-PX3G-2526-SM-48TZV 0.0
GTEX-PWOO-2026-SM-48TDE 0.0
GTEX-PWN1-2526-SM-48TDS 0.0
GTEX-PWCY-1726-SM-48TD3 0.0
GTEX-S4P3-1126-SM-4AD52 0.0
GTEX-P4PP-2526-SM-3P61P 0.0
GTEX-OHPL-2526-SM-3MJGT 0.0
GTEX-OHPK-2526-SM-3MJH9 0.0
GTEX-N7MT-1926-SM-3LK5N 0.0
GTEX-14DAQ-2326-SM-5S2QX 0.0
GTEX-14AS3-1726-SM-5RQJV 0.0
GTEX-14A5I-2726-SM-5SIB3 0.0
GTEX-146FH-2626-SM-5Q5E1 0.0
GTEX-145ME-1426-SM-5RQJS 0.0
Show all

VAGINA - FANTOM5 CAGEi

Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.

Read more

Average Tags Per Million

0.0

FANTOM5 sample id

Sample description

Tags Per Million

Vagina
Tags Per Million: 0.0
FF:10204-103F6 68 years, female 0.0

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