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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 60.8
Min RPKM: 4.1
Std RPKM: 13.2
Median RPKM: 27.3
GTEX-145MH-0011-R5a-SM-5P9JT
60.8
GTEX-13SLX-0011-R5a-SM-5O9BV
55.8
GTEX-WHSE-0011-R5A-SM-3P5ZO
53.8
GTEX-12WSC-0011-R5b-SM-5CVNS
48.6
GTEX-13O3O-0011-R5b-SM-5KM44
48.0
GTEX-Q2AG-0011-R5A-SM-2HMJH
47.0
GTEX-12ZZY-0011-R5a-SM-5EGL9
46.7
GTEX-13O3Q-0011-R5b-SM-5P9H4
46.2
GTEX-13X6J-0011-R5b-SM-5PNWT
46.0
GTEX-13G51-0011-R5a-SM-5L3EB
45.6
GTEX-T6MN-0011-R5A-SM-32QPD
45.1
GTEX-13FXS-0011-R5b-SM-5LZYE
45.0
GTEX-T5JC-0011-R5A-SM-32PLK
44.7
GTEX-ZUA1-0011-R5b-SM-51MTG
44.7
GTEX-1313W-0011-R5b-SM-5L3EP
43.6
GTEX-TSE9-0011-R5A-SM-3DB7J
42.7
GTEX-13VXU-0011-R5a-SM-5O9D7
41.3
GTEX-WL46-0011-R5A-SM-3LK6V
40.7
GTEX-1399T-0011-R5b-SM-5IJDK
39.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y
39.2
GTEX-13FLW-0011-R5a-SM-5LZX6
38.7
GTEX-13RTJ-0011-R5a-SM-5P9HR
38.7
GTEX-145LS-0011-R5a-SM-5SI65
38.7
GTEX-WZTO-0011-R5B-SM-3NMC5
38.3
GTEX-13N1W-0011-R5b-SM-5MR5Q
37.9
GTEX-Z93S-0011-R5b-SM-4RGNI
37.8
GTEX-N7MS-0011-R5a-SM-2HMK8
37.6
GTEX-11NV4-0011-R5a-SM-5NQ88
37.3
GTEX-131YS-0011-R5b-SM-5K7YB
36.6
GTEX-11OF3-0011-R5a-SM-57WB4
36.5
GTEX-13OW7-0011-R5b-SM-5O9DM
35.0
GTEX-13OVL-0011-R5b-SM-5L3FU
34.8
GTEX-13OW6-0011-R5a-SM-5O9BK
34.1
GTEX-139TT-0011-R5b-SM-5K7W8
34.0
GTEX-RU72-0011-R5A-SM-2TF6U
33.9
GTEX-S7SE-0011-R5A-SM-2XCDA
33.6
GTEX-R55E-0011-R5A-SM-2TC5N
33.4
GTEX-ZAB4-0011-R5a-SM-4SOKC
33.3
GTEX-13NYB-0011-R5a-SM-5MR45
32.9
GTEX-13OW8-0011-R5b-SM-5L3FQ
32.8
GTEX-13FHO-0011-R5b-SM-5LZZ3
32.5
GTEX-14ABY-0011-R5b-SM-5SI7B
32.1
GTEX-13X6K-0011-R5b-SM-5PNUE
32.0
GTEX-QVJO-0011-R5A-SM-2S1QM
32.0
GTEX-13OVH-0011-R5b-SM-5KM4L
31.9
GTEX-T2IS-0011-R5A-SM-32QP4
31.8
GTEX-UTHO-0011-R5A-SM-3GIJD
31.6
GTEX-11GSP-0011-R5a-SM-57WBE
31.4
GTEX-WWYW-0011-R5A-SM-3NB3E
31.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
30.4
GTEX-12WSF-0011-R5a-SM-5HL8K
29.4
GTEX-WVLH-0011-R5A-SM-3MJFW
29.4
GTEX-14BIM-0011-R5b-SM-5S2RM
28.9
GTEX-X585-0011-R5A-SM-46MVI
28.2
GTEX-11H98-0011-R5b-SM-57WCF
28.0
GTEX-13CZV-0011-R5a-SM-5K7XA
28.0
GTEX-13FLV-0011-R5a-SM-5LZWT
27.6
GTEX-13OW5-0011-R5b-SM-5L3FR
27.5
GTEX-ZE9C-0011-R5a-SM-5EGLO
27.3
GTEX-PVOW-0011-R5A-SM-32PL7
26.3
GTEX-12WSD-0011-R5b-SM-5CVNG
25.7
GTEX-12ZZX-0011-R5a-SM-5HL89
25.7
GTEX-XOTO-0011-R5A-SM-4B657
25.6
GTEX-13S7M-0011-R5b-SM-5P9HS
25.5
GTEX-Y8DK-0011-R5B-SM-4RTW6
25.5
GTEX-N7MT-0011-R5a-SM-2I3G6
24.5
GTEX-13NYS-0011-R5a-SM-5MR4D
24.3
GTEX-13X6I-0011-R5a-SM-5PNWW
23.9
GTEX-132Q8-0011-R5a-SM-5IJDM
22.4
GTEX-14BIN-0011-R5b-SM-5SI78
22.3
GTEX-13JUV-0011-R5a-SM-5LZY5
21.7
GTEX-13JVG-0011-R5a-SM-5MR4O
21.6
GTEX-RVPV-0011-R5A-SM-2TF69
21.6
GTEX-RVPU-0011-R5A-SM-2XCAD
21.1
GTEX-12ZZW-0011-R5a-SM-5DUVN
20.8
GTEX-ZE7O-0011-R5a-SM-57WBO
20.8
GTEX-YFC4-0011-R5a-SM-4RGLR
20.3
GTEX-NL4W-0011-R5a-SM-2I3GD
19.6
GTEX-YJ89-0011-R5a-SM-4V6GM
19.2
GTEX-NL3H-0011-R5a-SM-2I3GB
19.1
GTEX-P44H-0011-R5A-SM-2XCEX
18.9
GTEX-ZVZQ-0011-R5b-SM-57WDC
18.5
GTEX-13CIG-0011-R5b-SM-5L3F2
18.4
GTEX-ZXG5-0011-R5b-SM-57WBN
17.4
GTEX-OHPN-0011-R5A-SM-2I5FF
17.3
GTEX-ZF28-0011-R5a-SM-4WWCZ
17.0
GTEX-12WSA-0011-R5b-SM-5GU5I
16.2
GTEX-12WSB-0011-R5b-SM-5GU67
16.1
GTEX-OXRN-0011-R5A-SM-2I5EF
14.8
GTEX-144GL-0011-R5b-SM-5PNUJ
13.5
GTEX-XMD1-0011-R5A-SM-4AT47
13.3
GTEX-12WSH-0011-R5b-SM-5P9F3
13.0
GTEX-13SLW-0011-R5b-SM-5SI6Z
12.2
GTEX-NPJ8-0011-R5a-SM-2HMJY
12.1
GTEX-13112-0011-R5b-SM-5DUV8
11.8
GTEX-11WQC-0011-R5a-SM-5BC74
11.7
GTEX-QMR6-0011-R5A-SM-32PKT
11.5
GTEX-X4XX-0011-R5A-SM-46MWN
11.2
GTEX-144GO-0011-R5a-SM-5PNUR
10.8
GTEX-PWO3-0011-R5A-SM-2I5EZ
10.4
GTEX-ZV68-0011-R5a-SM-4YCDW
9.9
GTEX-13PVQ-0011-R5b-SM-5O9DI
9.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
9.5
GTEX-13FHP-0011-R5b-SM-5LZY2
9.2
GTEX-ZVT3-0011-R5a-SM-51MSI
7.7
GTEX-13OVJ-0011-R5a-SM-5P9H7
7.6
GTEX-X261-0011-R5A-SM-3NMB4
7.6
GTEX-139TS-0011-R5b-SM-5J2MZ
7.3
GTEX-1445S-0011-R5a-SM-5PNUS
7.3
GTEX-1477Z-0011-R5b-SM-5PNUO
7.3
GTEX-139T8-0011-R5b-SM-5J1MO
6.5
GTEX-NPJ7-0011-R5a-SM-33HBK
6.4
GTEX-13CF2-0011-R5a-SM-5LZWS
6.1
GTEX-S7PM-0011-R5A-SM-3NM8G
5.5
GTEX-11UD1-0011-R5b-SM-5P9FP
5.3
GTEX-145MG-0011-R5b-SM-5S2VU
4.7
GTEX-13NZA-0011-R5b-SM-5KM4K
4.1
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CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.