Tissue expression of C3orf17 - Summary - The Human Protein Atlas

GENERAL INFORMATION
Gene name	C3orf17
Gene description	Chromosome 3 open reading frame 17
Protein class	Predicted intracellular proteins Predicted membrane proteins
Predicted localization	Intracellular,Membrane
Number of transcripts	3
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Expressed in all
GTEx:	Expressed in all
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

DATA RELIABILITY
Reliability score	Pending normal tissue annotation.

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

N/A

Cerebral cortex

N/A

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

N/A

Thyroid gland

N/A

Parathyroid gland

N/A

Adrenal gland

N/A

Bone marrow & immune system

N/A

Appendix

N/A

Bone marrow

N/A

Lymph node

N/A

Tonsil

N/A

Spleen

N/A

Muscle tissues

N/A

Heart muscle

N/A

Skeletal muscle

N/A

Smooth muscle

N/A

Lung

N/A

Nasopharynx

N/A

Bronchus

N/A

Lung

N/A

Liver & gallbladder

N/A

Liver

N/A

Gallbladder

N/A

Pancreas

N/A

Pancreas

N/A

Gastrointestinal tract

N/A

Oral mucosa

N/A

Salivary gland

N/A

Esophagus

N/A

Stomach

N/A

Duodenum

N/A

Small intestine

N/A

Colon

N/A

Rectum

N/A

Kidney & urinary bladder

N/A

Kidney

N/A

Urinary bladder

N/A

Male tissues

N/A

Testis

N/A

Epididymis

N/A

Prostate

N/A

Seminal vesicle

N/A

Female tissues

N/A

Breast

N/A

Vagina

N/A

Cervix, uterine

N/A

Endometrium

N/A

Fallopian tube

N/A

Ovary

N/A

Placenta

N/A

Adipose & soft tissue

N/A

Adipose tissue

N/A

Soft tissue

N/A

Skin

N/A

Skin

N/A

PROTEIN EXPRESSION OVERVIEW
Pending normal tissue annotation.

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
GTEx dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	C3orf17 (HGNC Symbol)
Synonyms	DKFZP434F2021, NET17
Description	Chromosome 3 open reading frame 17 (HGNC Symbol)
Entrez gene summary
Chromosome	3
Cytoband	q13.2
Chromosome location (bp)	113002440 - 113019861
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000163608 (version 83.38)
Entrez gene	25871
UniProt	Q6NW34 (UniProt - Evidence at protein level)
neXtProt	NX_Q6NW34
Antibodypedia	C3orf17 antibodies

PROTEIN BROWSER

C3orf17-001	C3orf17-002	C3orf17-015

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
C3orf17-001 ENSP00000320251 ENST00000314400	Q6NW34 [Direct mapping] Uncharacterized protein C3orf17 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005634 [nucleus] GO:0016021 [integral component of membrane] GO:0045665 [negative regulation of neuron differentiation] GO:0045747 [positive regulation of Notch signaling pathway] Show all	567 aa 64.6 kDa	No	1
C3orf17-002 ENSP00000373173 ENST00000383675	Q6NW34 [Direct mapping] Uncharacterized protein C3orf17 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] Show all	497 aa 56.7 kDa	No	0
C3orf17-015 ENSP00000417613 ENST00000472166	C9J9E3 [Direct mapping] Uncharacterized protein C3orf17 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		81 aa 9.1 kDa	No	0