Tissue expression of CCDC38 - Summary - The Human Protein Atlas

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CCDC38

TISSUE

CELL

CANCER

TISSUE ATLAS

GENE/PROTEIN

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	CCDC38
Gene description	Coiled-coil domain containing 38
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	3
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Tissue enriched (testis)
GTEx:	Tissue enriched (testis)
FANTOM5:	Tissue enriched (testis)

Protein evidence

Evidence at protein level

DATA RELIABILITY
Reliability score	Pending normal tissue annotation.

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

N/A

Cerebral cortex

N/A

Hippocampus

N/A

N/A

Caudate

N/A

N/A

Cerebellum

N/A

N/A

Endocrine tissues

N/A

Thyroid gland

N/A

Parathyroid gland

N/A

Adrenal gland

N/A

Bone marrow & immune system

N/A

Appendix

N/A

Bone marrow

N/A

Lymph node

N/A

Tonsil

N/A

Spleen

N/A

Muscle tissues

N/A

Heart muscle

N/A

Skeletal muscle

N/A

Smooth muscle

N/A

Lung

N/A

Nasopharynx

N/A

N/A

Bronchus

N/A

N/A

Lung

N/A

Liver & gallbladder

N/A

Liver

N/A

Gallbladder

N/A

Pancreas

N/A

Pancreas

N/A

Gastrointestinal tract

N/A

Oral mucosa

N/A

N/A

Salivary gland

N/A

Esophagus

N/A

Stomach

N/A

Duodenum

N/A

Small intestine

N/A

Colon

N/A

Rectum

N/A

Kidney & urinary bladder

N/A

Kidney

N/A

Urinary bladder

N/A

Male tissues

N/A

Testis

N/A

Epididymis

N/A

Prostate

N/A

Seminal vesicle

N/A

Female tissues

N/A

Breast

N/A

Vagina

N/A

N/A

Cervix, uterine

N/A

Endometrium

N/A

Fallopian tube

N/A

Ovary

N/A

Placenta

N/A

Adipose & soft tissue

N/A

Adipose tissue

N/A

Soft tissue

N/A

N/A

Skin

N/A

Skin

N/A

PROTEIN EXPRESSION OVERVIEW
Pending normal tissue annotation.

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Tissue enriched (testis)
GTEx dataset Organ Expression Alphabetical RNA tissue category: Tissue enriched (testis)
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Tissue enriched (testis)

GENE INFORMATION
Gene name	CCDC38 (HGNC Symbol)
Synonyms	FLJ40089
Description	Coiled-coil domain containing 38 (HGNC Symbol)
Entrez gene summary
Chromosome	12
Cytoband	q23.1
Chromosome location (bp)	95867048 - 95942974
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000165972 (version 83.38)
Entrez gene	120935
UniProt	Q502W7 (UniProt - Evidence at transcript level)
neXtProt	NX_Q502W7
Antibodypedia	CCDC38 antibodies

PROTEIN BROWSER

CCDC38-001	CCDC38-002	CCDC38-006

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
CCDC38-001 ENSP00000345470 ENST00000344280	Q502W7 [Direct mapping] Coiled-coil domain-containing protein 38 Show all	Predicted intracellular proteins Show all	GO:0005737 [cytoplasm] GO:0005813 [centrosome] Show all	563 aa 65.3 kDa	No	0
CCDC38-002 ENSP00000448644 ENST00000546386	F8VRK3 [Direct mapping] Coiled-coil domain-containing protein 38 Show all	Predicted intracellular proteins Show all		13 aa 1.3 kDa	No	0
CCDC38-006 ENSP00000449001 ENST00000546947	F8VY05 [Direct mapping] Coiled-coil domain-containing protein 38 Show all	Predicted intracellular proteins Show all		62 aa 7.2 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.