We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
MMP10
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA PROSTATE

GENE/PROTEIN

Antibody validation


Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

RNA expressioni

RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.

Read more

HPA:1.8TPM
GTEx:1.1RPKM
FANTOM5:1.9Tags Per Million

PROSTATE - Annotated protein expressioni

The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.

Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.

The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.

For histological reference, view the histological dictionary.

 

Antibody stainingi

This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.

Read more

Antibody CAB002159

 

Glandular cells

Medium  
 
 
 

PROSTATE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Read more

Average TPM

1.8

overview Male, age 62
Sample 1
TPM: 0.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65
Sample 2
TPM: 1.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65
Sample 3
TPM: 2.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68
Sample 4
TPM: 0.8
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60
Sample 5
TPM: 6.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66
Sample 6
TPM: 0.0
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63
Sample 7
TPM: 1.8
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66
Sample 8
TPM: 0.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58
Sample 9
TPM: 5.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seqi

RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.

Read more

Average RPKM

1.1

GTEx sample id

RPKM

 

Prostate

Prostate
RPKM: 1.1
Samples: 106

Max RPKM: 17.1
Min RPKM: 0
Std RPKM: 2.7
Median RPKM: 0.1
GTEX-XPVG-2026-SM-4B65E 17.1
GTEX-11TT1-2026-SM-5EQM8 13.1
GTEX-12BJ1-1226-SM-5LUAE 11.7
GTEX-QLQ7-1326-SM-4R1JY 8.3
GTEX-WFG8-1826-SM-4LVM4 8.2
GTEX-13O61-1726-SM-5KM46 6.4
GTEX-S3XE-1326-SM-4AD4H 5.4
GTEX-WFON-1626-SM-4LVMV 4.9
GTEX-ZDYS-1226-SM-5IJF3 3.8
GTEX-OOBJ-2026-SM-3NB1R 3.4
GTEX-11O72-2726-SM-5HL6K 2.9
GTEX-13N2G-1826-SM-5KM1I 2.9
GTEX-ZY6K-1526-SM-5GZXE 2.6
GTEX-13OW8-0426-SM-5J2NR 2.1
GTEX-U8XE-2526-SM-4E3IT 1.9
GTEX-XMK1-1026-SM-4B65H 1.8
GTEX-111YS-1726-SM-5GIED 1.2
GTEX-QMRM-1426-SM-4R1K8 1.0
GTEX-11NSD-0826-SM-5986S 0.8
GTEX-13FTW-1226-SM-5LZZ1 0.8
GTEX-13FXS-2826-SM-5LZYC 0.8
GTEX-REY6-2126-SM-48FD9 0.8
GTEX-S33H-1826-SM-4AD65 0.8
GTEX-S95S-1026-SM-4B64M 0.8
GTEX-ZTX8-1026-SM-5EGHD 0.8
GTEX-Q2AI-1126-SM-48U19 0.7
GTEX-U412-2026-SM-4DXSI 0.7
GTEX-ZPU1-2026-SM-57WFI 0.7
GTEX-11TUW-2126-SM-5GU7B 0.6
GTEX-14BMV-2326-SM-5RQJ4 0.5
GTEX-QV44-1526-SM-4R1KI 0.5
GTEX-YF7O-1926-SM-4W1YQ 0.5
GTEX-139T6-1526-SM-5P9G6 0.4
GTEX-YJ8A-1126-SM-5IFJU 0.4
GTEX-117YW-1426-SM-5EGGO 0.3
GTEX-11OF3-1726-SM-5GU5Q 0.3
GTEX-13FHO-2826-SM-5K7ZA 0.3
GTEX-UTHO-2726-SM-4JBH9 0.3
GTEX-1399R-0526-SM-5IJEF 0.2
GTEX-13G51-2326-SM-5LZXV 0.2
GTEX-WFG7-1826-SM-3GIL1 0.2
GTEX-ZT9W-1626-SM-4YCDQ 0.2
GTEX-117YX-1526-SM-5H12T 0.1
GTEX-1399T-1226-SM-5P9J5 0.1
GTEX-144GM-0826-SM-5O98R 0.1
GTEX-145LT-0626-SM-5O99E 0.1
GTEX-145LV-1226-SM-5S2QH 0.1
GTEX-14E6E-1126-SM-5S2R4 0.1
GTEX-QV31-1026-SM-4R1K3 0.1
GTEX-SNOS-1026-SM-4DM4Y 0.1
GTEX-U4B1-1426-SM-4DXTX 0.1
GTEX-V955-1826-SM-4JBIL 0.1
GTEX-VJYA-1226-SM-3GIJ6 0.1
GTEX-WH7G-1726-SM-4LVKY 0.1
GTEX-XOTO-2826-SM-4B65I 0.1
GTEX-Y8E4-2126-SM-5RQHO 0.1
GTEX-ZVP2-0826-SM-59HJ6 0.1
GTEX-111CU-1526-SM-5N9FS 0.0
GTEX-111FC-2026-SM-5GZYO 0.0
GTEX-11DYG-2526-SM-5N9BB 0.0
GTEX-11EQ9-1726-SM-5HL6U 0.0
GTEX-11P7K-0626-SM-5985Z 0.0
GTEX-11P82-1126-SM-5BC5K 0.0
GTEX-11WQK-2726-SM-5EQMU 0.0
GTEX-11ZUS-2126-SM-5N9E6 0.0
GTEX-12696-2226-SM-5EQ65 0.0
GTEX-12C56-1326-SM-5FQSV 0.0
GTEX-12ZZZ-2026-SM-5LZWJ 0.0
GTEX-13111-1326-SM-5GCNO 0.0
GTEX-131XF-1926-SM-5DUW4 0.0
GTEX-132NY-2826-SM-5P9G2 0.0
GTEX-132QS-1126-SM-5P9GC 0.0
GTEX-13NYS-1026-SM-5KLZT 0.0
GTEX-13O21-1126-SM-5N9EV 0.0
GTEX-13RTJ-2126-SM-5S2PZ 0.0
GTEX-146FQ-1726-SM-5QGPX 0.0
GTEX-148VJ-1826-SM-5Q5DV 0.0
GTEX-14ABY-0726-SM-5Q5DF 0.0
GTEX-14C5O-2826-SM-5RQI6 0.0
GTEX-NFK9-2226-SM-3MJGP 0.0
GTEX-NPJ8-2426-SM-3MJHL 0.0
GTEX-OIZH-2026-SM-3NB1M 0.0
GTEX-OOBK-2025-SM-3LK5S 0.0
GTEX-PLZ6-1126-SM-3P5ZR 0.0
GTEX-QEG4-2226-SM-4R1JM 0.0
GTEX-RM2N-1126-SM-48FCY 0.0
GTEX-RWSA-2026-SM-47JX8 0.0
GTEX-S4Q7-1026-SM-4AD75 0.0
GTEX-SJXC-2026-SM-4DM6N 0.0
GTEX-SNMC-0926-SM-4DM5U 0.0
GTEX-T8EM-1826-SM-4DM7F 0.0
GTEX-U3ZM-0926-SM-4DXSW 0.0
GTEX-V1D1-1926-SM-4JBGX 0.0
GTEX-WK11-2626-SM-4OOSK 0.0
GTEX-WOFM-0326-SM-4OOSL 0.0
GTEX-WZTO-0926-SM-4PQZ3 0.0
GTEX-X5EB-1826-SM-4E3K8 0.0
GTEX-XAJ8-0626-SM-47JY4 0.0
GTEX-XGQ4-1826-SM-4AT6F 0.0
GTEX-XQ3S-2526-SM-4BOOG 0.0
GTEX-Y9LG-1826-SM-4VBQC 0.0
GTEX-YB5E-1826-SM-5IFI4 0.0
GTEX-ZLFU-1726-SM-4WWBU 0.0
GTEX-ZTTD-2726-SM-57WFA 0.0
GTEX-ZUA1-2826-SM-59HLE 0.0
GTEX-ZZ64-0926-SM-5E44L 0.0
Show all

PROSTATE - FANTOM5 CAGEi

Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.

Read more

Average Tags Per Million

1.9

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 1.9
FF:10022-101D4 73,79,93 years, male 1.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.