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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 77.9
Min RPKM: 4.5
Std RPKM: 12.8
Median RPKM: 21.8
GTEX-WL46-0011-R5A-SM-3LK6V
77.9
GTEX-X4XX-0011-R5A-SM-46MWN
75.9
GTEX-RVPV-0011-R5A-SM-2TF69
52.2
GTEX-X585-0011-R5A-SM-46MVI
50.3
GTEX-13NYB-0011-R5a-SM-5MR45
48.8
GTEX-11NV4-0011-R5a-SM-5NQ88
48.1
GTEX-13O3O-0011-R5b-SM-5KM44
47.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
46.1
GTEX-13FXS-0011-R5b-SM-5LZYE
42.1
GTEX-N7MS-0011-R5a-SM-2HMK8
41.8
GTEX-Z93S-0011-R5b-SM-4RGNI
41.5
GTEX-13X6I-0011-R5a-SM-5PNWW
41.0
GTEX-WZTO-0011-R5B-SM-3NMC5
41.0
GTEX-13FLV-0011-R5a-SM-5LZWT
37.3
GTEX-QMR6-0011-R5A-SM-32PKT
37.1
GTEX-R55E-0011-R5A-SM-2TC5N
36.5
GTEX-12WSF-0011-R5a-SM-5HL8K
36.4
GTEX-13OW8-0011-R5b-SM-5L3FQ
36.2
GTEX-ZAB4-0011-R5a-SM-4SOKC
36.0
GTEX-WVLH-0011-R5A-SM-3MJFW
35.1
GTEX-13FHP-0011-R5b-SM-5LZY2
34.1
GTEX-XOTO-0011-R5A-SM-4B657
34.0
GTEX-13FLW-0011-R5a-SM-5LZX6
33.9
GTEX-PVOW-0011-R5A-SM-32PL7
33.4
GTEX-13OVH-0011-R5b-SM-5KM4L
32.9
GTEX-13FHO-0011-R5b-SM-5LZZ3
30.6
GTEX-14BIN-0011-R5b-SM-5SI78
30.4
GTEX-13OW7-0011-R5b-SM-5O9DM
30.3
GTEX-13PVQ-0011-R5b-SM-5O9DI
30.1
GTEX-13X6K-0011-R5b-SM-5PNUE
29.9
GTEX-13N1W-0011-R5b-SM-5MR5Q
29.5
GTEX-12WSA-0011-R5b-SM-5GU5I
29.4
GTEX-WWYW-0011-R5A-SM-3NB3E
28.9
GTEX-12ZZY-0011-R5a-SM-5EGL9
28.8
GTEX-145MH-0011-R5a-SM-5P9JT
28.2
GTEX-Y8DK-0011-R5B-SM-4RTW6
27.5
GTEX-13RTJ-0011-R5a-SM-5P9HR
27.4
GTEX-12WSB-0011-R5b-SM-5GU67
27.1
GTEX-13SLX-0011-R5a-SM-5O9BV
27.0
GTEX-ZXG5-0011-R5b-SM-57WBN
27.0
GTEX-131YS-0011-R5b-SM-5K7YB
26.9
GTEX-13JVG-0011-R5a-SM-5MR4O
26.8
GTEX-13SLW-0011-R5b-SM-5SI6Z
26.3
GTEX-145LS-0011-R5a-SM-5SI65
26.2
GTEX-13OVL-0011-R5b-SM-5L3FU
25.0
GTEX-XMD1-0011-R5A-SM-4AT47
24.6
GTEX-13OVJ-0011-R5a-SM-5P9H7
24.5
GTEX-14ABY-0011-R5b-SM-5SI7B
24.4
GTEX-11GSP-0011-R5a-SM-57WBE
24.3
GTEX-13S7M-0011-R5b-SM-5P9HS
24.2
GTEX-13O3Q-0011-R5b-SM-5P9H4
24.1
GTEX-ZUA1-0011-R5b-SM-51MTG
23.9
GTEX-144GL-0011-R5b-SM-5PNUJ
23.7
GTEX-YFC4-0011-R5a-SM-4RGLR
23.0
GTEX-132Q8-0011-R5a-SM-5IJDM
22.9
GTEX-13OW6-0011-R5a-SM-5O9BK
22.7
GTEX-ZF28-0011-R5a-SM-4WWCZ
22.7
GTEX-1399T-0011-R5b-SM-5IJDK
21.8
GTEX-S7SE-0011-R5A-SM-2XCDA
21.8
GTEX-14BIM-0011-R5b-SM-5S2RM
20.6
GTEX-ZE7O-0011-R5a-SM-57WBO
20.4
GTEX-13VXU-0011-R5a-SM-5O9D7
20.2
GTEX-QVJO-0011-R5A-SM-2S1QM
20.2
GTEX-13OW5-0011-R5b-SM-5L3FR
19.4
GTEX-WHSE-0011-R5A-SM-3P5ZO
19.3
GTEX-13112-0011-R5b-SM-5DUV8
19.0
GTEX-RVPU-0011-R5A-SM-2XCAD
18.9
GTEX-11H98-0011-R5b-SM-57WCF
18.8
GTEX-11WQC-0011-R5a-SM-5BC74
18.7
GTEX-ZVT3-0011-R5a-SM-51MSI
18.7
GTEX-OHPN-0011-R5A-SM-2I5FF
18.6
GTEX-NL4W-0011-R5a-SM-2I3GD
18.5
GTEX-12WSD-0011-R5b-SM-5CVNG
18.4
GTEX-13G51-0011-R5a-SM-5L3EB
18.4
GTEX-Q2AG-0011-R5A-SM-2HMJH
17.9
GTEX-12WSC-0011-R5b-SM-5CVNS
17.6
GTEX-1313W-0011-R5b-SM-5L3EP
17.6
GTEX-UTHO-0011-R5A-SM-3GIJD
17.4
GTEX-12ZZW-0011-R5a-SM-5DUVN
17.3
GTEX-13X6J-0011-R5b-SM-5PNWT
17.1
GTEX-ZVZQ-0011-R5b-SM-57WDC
17.0
GTEX-T5JC-0011-R5A-SM-32PLK
16.9
GTEX-T6MN-0011-R5A-SM-32QPD
16.8
GTEX-139TS-0011-R5b-SM-5J2MZ
16.3
GTEX-N7MT-0011-R5a-SM-2I3G6
16.1
GTEX-13CF2-0011-R5a-SM-5LZWS
15.8
GTEX-11OF3-0011-R5a-SM-57WB4
15.5
GTEX-RU72-0011-R5A-SM-2TF6U
15.2
GTEX-1445S-0011-R5a-SM-5PNUS
14.3
GTEX-144GO-0011-R5a-SM-5PNUR
14.3
GTEX-13JUV-0011-R5a-SM-5LZY5
13.9
GTEX-12WSH-0011-R5b-SM-5P9F3
13.7
GTEX-13NYS-0011-R5a-SM-5MR4D
13.7
GTEX-X261-0011-R5A-SM-3NMB4
13.4
GTEX-NL3H-0011-R5a-SM-2I3GB
13.3
GTEX-TSE9-0011-R5A-SM-3DB7J
13.3
GTEX-13CZV-0011-R5a-SM-5K7XA
12.5
GTEX-12ZZX-0011-R5a-SM-5HL89
12.3
GTEX-13PLJ-0011-R5a-SM-5O9BG
12.2
GTEX-ZE9C-0011-R5a-SM-5EGLO
12.1
GTEX-139TT-0011-R5b-SM-5K7W8
11.5
GTEX-NPJ7-0011-R5a-SM-33HBK
11.1
GTEX-ZV68-0011-R5a-SM-4YCDW
10.5
GTEX-139T8-0011-R5b-SM-5J1MO
10.1
GTEX-P44H-0011-R5A-SM-2XCEX
10.1
GTEX-YJ89-0011-R5a-SM-4V6GM
10.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y
9.9
GTEX-1477Z-0011-R5b-SM-5PNUO
9.9
GTEX-NPJ8-0011-R5a-SM-2HMJY
9.8
GTEX-11UD1-0011-R5b-SM-5P9FP
8.9
GTEX-PWO3-0011-R5A-SM-2I5EZ
8.6
GTEX-OXRN-0011-R5A-SM-2I5EF
8.5
GTEX-S7PM-0011-R5A-SM-3NM8G
7.6
GTEX-13CIG-0011-R5b-SM-5L3F2
6.1
GTEX-13NZA-0011-R5b-SM-5KM4K
5.1
GTEX-145MG-0011-R5b-SM-5S2VU
5.0
GTEX-T2IS-0011-R5A-SM-32QP4
4.5
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.