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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 40.3
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 169.4
Min RPKM: 9.6
Std RPKM: 20.6
Median RPKM: 30.3
GTEX-13G51-3026-SM-5IJB8
169.4
GTEX-N7MT-1126-SM-5SI7V
101.8
GTEX-12ZZY-3026-SM-5GCOU
88.1
GTEX-11GS4-3126-SM-5A5LH
84.6
GTEX-1192X-3126-SM-5N9BY
80.9
GTEX-13FHP-3026-SM-5IJBS
73.0
GTEX-13PVQ-3026-SM-5SI93
69.7
GTEX-13OW8-2826-SM-5L3GC
67.0
GTEX-13NYB-3026-SM-5IJD7
63.1
GTEX-WL46-2926-SM-3LK82
62.0
GTEX-111FC-3126-SM-5GZZ2
60.4
GTEX-1313W-3126-SM-5LZUI
58.3
GTEX-ZAJG-3126-SM-5HL9J
57.3
GTEX-13FHO-3026-SM-5J1O9
56.7
GTEX-WHSE-3026-SM-3P5ZH
55.6
GTEX-11ONC-2926-SM-5P9JM
54.7
GTEX-13FLW-1426-SM-5K7YE
52.9
GTEX-11OF3-2926-SM-5HL78
51.2
GTEX-X585-3026-SM-46MWF
50.4
GTEX-NPJ8-1526-SM-2D7VU
50.3
GTEX-XOTO-3026-SM-4B65M
48.8
GTEX-YFC4-3126-SM-5PNV6
47.6
GTEX-12WSA-2926-SM-5EQ4D
47.5
GTEX-T6MN-2626-SM-32PMQ
47.2
GTEX-13OW6-3026-SM-5J2MI
45.2
GTEX-13OVJ-2826-SM-5L3GW
44.3
GTEX-145MF-2726-SM-5O995
42.7
GTEX-QVUS-2826-SM-3GADB
42.1
GTEX-14ASI-3026-SM-5S2PN
41.7
GTEX-T5JC-2426-SM-3NMDB
41.7
GTEX-13SLX-3126-SM-5S2Q5
41.6
GTEX-13OVH-3026-SM-5MR4N
41.2
GTEX-Y111-2726-SM-4TT3N
41.1
GTEX-XLM4-3026-SM-4AT6L
41.0
GTEX-14BMV-3026-SM-5S2PQ
39.6
GTEX-117XS-3026-SM-5N9CA
38.2
GTEX-13FXS-3126-SM-5J2NN
37.0
GTEX-13JUV-2926-SM-5LZX7
36.7
GTEX-ZYFD-3026-SM-5E44C
36.7
GTEX-11ZUS-2926-SM-5FQSL
36.2
GTEX-144FL-3026-SM-5O99C
35.9
GTEX-WVLH-3026-SM-3MJG9
35.4
GTEX-13VXU-2926-SM-5LU5C
35.0
GTEX-1117F-3226-SM-5N9CT
34.6
GTEX-QDT8-2926-SM-32PKC
33.7
GTEX-11DXY-3226-SM-5GIDE
32.7
GTEX-12ZZX-2926-SM-5GCOQ
32.5
GTEX-11NV4-2126-SM-5N9DS
32.0
GTEX-Y8DK-0826-SM-4TT3T
32.0
GTEX-145LS-3126-SM-5Q5BY
31.2
GTEX-ZUA1-3026-SM-59HJC
31.2
GTEX-12126-1026-SM-5P9JJ
31.0
GTEX-Q2AG-2926-SM-2HMJ3
31.0
GTEX-WWYW-3126-SM-3NB39
30.9
GTEX-12WSC-3026-SM-5GCNF
30.8
GTEX-13O3O-3126-SM-5KM3H
30.5
GTEX-Z93S-2926-SM-57WB9
30.4
GTEX-11DXW-1126-SM-5H12Q
30.3
GTEX-145MG-3026-SM-5RQJA
30.3
GTEX-145MH-3026-SM-5Q5DZ
30.0
GTEX-13OW7-3026-SM-5L3GY
29.6
GTEX-12ZZZ-3026-SM-5BC67
29.5
GTEX-13NYS-3126-SM-5KLYV
29.5
GTEX-1445S-3026-SM-5O9BR
29.5
GTEX-11OC5-0726-SM-5P9JK
29.2
GTEX-12WSD-3126-SM-5HL7P
28.8
GTEX-1399T-3026-SM-5KLZC
28.8
GTEX-11GSO-2926-SM-5HL73
28.7
GTEX-13QIC-2926-SM-5J2NF
28.6
GTEX-QMR6-1426-SM-32PLA
28.3
GTEX-1128S-2726-SM-5H12C
27.9
GTEX-X4XX-3026-SM-3NMB2
27.8
GTEX-13O3Q-2926-SM-5KM45
27.7
GTEX-13S7M-3126-SM-5RQJQ
27.7
GTEX-11PRG-2926-SM-5987A
27.6
GTEX-11WQK-3026-SM-5EQL6
27.6
GTEX-UTHO-3026-SM-3GAFB
27.5
GTEX-147GR-3026-SM-5S2ML
26.9
GTEX-TSE9-3026-SM-3DB76
26.4
GTEX-ZAK1-3026-SM-5S2MJ
26.4
GTEX-13NYC-2826-SM-5K7WR
26.1
GTEX-YJ89-3026-SM-5IFJI
26.1
GTEX-144GL-3026-SM-5Q5CW
25.5
GTEX-11NUK-2926-SM-5A5MD
24.6
GTEX-131YS-3126-SM-5KLYT
24.4
GTEX-ZZPT-3026-SM-5GZXH
24.2
GTEX-R55F-1326-SM-5S2V4
23.9
GTEX-RNOR-2326-SM-2TF4I
23.7
GTEX-WZTO-2926-SM-3NM9I
23.5
GTEX-ZVT3-3026-SM-5E43N
22.9
GTEX-13X6J-3026-SM-5Q5CU
22.5
GTEX-11EMC-3226-SM-5EGKW
22.4
GTEX-11O72-2926-SM-5BC4V
22.3
GTEX-PVOW-2526-SM-2XCF7
22.0
GTEX-QVJO-1426-SM-2S1QY
22.0
GTEX-NPJ7-2726-SM-2I3FT
21.7
GTEX-132Q8-3026-SM-5PNVG
21.3
GTEX-12WSH-3026-SM-5CVNI
21.1
GTEX-12ZZW-2926-SM-5LZUP
21.1
GTEX-13JVG-3126-SM-5L3FH
21.0
GTEX-RU72-3026-SM-5SI7Y
20.8
GTEX-13PL6-3126-SM-5LUAR
20.1
GTEX-14A5I-2926-SM-5Q5CQ
20.1
GTEX-T2IS-3026-SM-32QPM
20.0
GTEX-13X6K-2926-SM-5Q5D5
19.7
GTEX-11EI6-3026-SM-5GZZO
19.3
GTEX-11GSP-3226-SM-5986O
18.6
GTEX-OXRN-2426-SM-2I5EQ
18.1
GTEX-11TTK-2926-SM-5PNYP
17.5
GTEX-139T8-1026-SM-5J2MC
16.4
GTEX-ZE7O-3126-SM-5HL5X
14.6
GTEX-13IVO-2926-SM-5L3CZ
14.2
GTEX-131XW-3126-SM-5LZUC
13.2
GTEX-PWO3-0926-SM-2I5EY
9.6
Show all
Brain - Frontal Cortex (BA9)
Brain - Frontal Cortex (BA9) RPKM: 23.8
Samples: 108
Max RPKM: 68.4
Min RPKM: 4.2
Std RPKM: 10
Median RPKM: 24
GTEX-XMD1-0011-R10A-SM-4AT4A
68.4
GTEX-13FLW-0011-R10b-SM-5LZZF
53.5
GTEX-13N1W-0011-R10b-SM-5MR4H
46.8
GTEX-13CZV-0011-R10b-SM-5LZYD
45.1
GTEX-ZE7O-0011-R10a-SM-57WAZ
44.1
GTEX-ZDXO-0011-R10a-SM-4WWD8
43.3
GTEX-YFC4-0011-R10a-SM-4SOK5
38.8
GTEX-13X6K-0011-R10a-SM-5P9JR
37.9
GTEX-13OVL-0011-R10a-SM-5L3GS
37.1
GTEX-S7SE-0011-R10A-SM-2XCDF
36.2
GTEX-X585-0011-R10A-SM-46MUY
35.9
GTEX-XLM4-0011-R10A-SM-4AT5P
35.4
GTEX-X4XX-0011-R10B-SM-46MWO
33.6
GTEX-12WSA-0011-R10b-SM-5P9ET
33.3
GTEX-13S7M-0011-R10b-SM-5PNZB
33.0
GTEX-131XH-0011-R10a-SM-5EGLJ
32.8
GTEX-145MH-0011-R10b-SM-5PNUK
32.8
GTEX-WVLH-0011-R10A-SM-3MJFM
32.6
GTEX-WWYW-0011-R10A-SM-3NB35
32.1
GTEX-Y8DK-0011-R10A-SM-4SOK1
31.9
GTEX-13RTJ-0011-R10b-SM-5O9CW
30.6
GTEX-ZVZQ-0011-R10b-SM-51MRT
29.8
GTEX-13FLV-0011-R10b-SM-5LZZ2
29.1
GTEX-ZAB4-0011-R10a-SM-4SOKH
28.9
GTEX-12WSF-0011-R10a-SM-5LZVH
28.8
GTEX-13G51-0011-R10b-SM-5LZYF
28.6
GTEX-13OW7-0011-R10a-SM-5L3H3
28.4
GTEX-N7MT-0011-R10A-SM-2I3E1
28.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC
28.2
GTEX-NL3H-0011-R10A-SM-2I3E9
27.7
GTEX-145MG-0011-R10a-SM-5PNWG
27.5
GTEX-13FXS-0011-R10a-SM-5J2MA
27.4
GTEX-Q2AG-0011-R10A-SM-2HMLA
27.3
GTEX-12WSM-0011-R10a-SM-5DUWV
27.0
GTEX-13OW8-0011-R10a-SM-5L3H6
26.7
GTEX-13FHO-0011-R10b-SM-5J2MM
26.6
GTEX-12WSE-0011-R10b-SM-5P9JV
26.3
GTEX-T6MN-0011-R10A-SM-32QP7
26.0
GTEX-132Q8-0011-R10b-SM-5DUWZ
25.9
GTEX-131YS-0011-R10b-SM-5EQ5N
25.8
GTEX-14ASI-0011-R10b-SM-5S2VZ
25.4
GTEX-T5JC-0011-R10A-SM-32PM2
25.3
GTEX-11GSP-0011-R10a-SM-5NQ7J
24.9
GTEX-12ZZX-0011-R10b-SM-5DUWK
24.9
GTEX-ZF28-0011-R10a-SM-4WWEH
24.8
GTEX-14BIL-0011-R10a-SM-5SI75
24.6
GTEX-1313W-0011-R10b-SM-5DUXA
24.4
GTEX-WL46-0011-R10A-SM-3MJFQ
24.4
GTEX-145LS-0011-R10a-SM-5PNUQ
24.3
GTEX-YJ89-0011-R10a-SM-4SOK9
24.3
GTEX-13O3O-0011-R10a-SM-5LUA9
24.1
GTEX-NPJ8-0011-R10A-SM-2YUMO
24.1
GTEX-QVJO-0011-R10A-SM-2S1QJ
24.1
GTEX-WZTO-0011-R10B-SM-4E3KB
24.1
GTEX-13QIC-0011-R10a-SM-5O9C7
24.0
GTEX-12WSC-0011-R10a-SM-5GU57
23.9
GTEX-13OW6-0011-R10a-SM-5L3HE
23.9
GTEX-13QJC-0011-R10a-SM-5SI63
23.3
GTEX-QDT8-0011-R10A-SM-32PKG
23.3
GTEX-13JUV-0011-R10b-SM-5LZXR
22.8
GTEX-13SLX-0011-R10a-SM-5P9HV
22.7
GTEX-RVPU-0011-R10A-SM-2XCAH
22.2
GTEX-12WSH-0011-R10a-SM-5LZUS
21.9
GTEX-14BIN-0011-R10a-SM-5S2UA
21.6
GTEX-N7MS-0011-R10A-SM-2HMJK
21.3
GTEX-TSE9-0011-R10A-SM-3DB7O
21.1
GTEX-Z93S-0011-R10a-SM-4RGNM
21.1
GTEX-147GR-0011-R10b-SM-5S2UM
21.0
GTEX-13O3Q-0011-R10b-SM-5KM39
20.8
GTEX-13X6I-0011-R10a-SM-5PNWI
20.6
GTEX-13NYS-0011-R10a-SM-5MR4S
20.3
GTEX-13X6J-0011-R10b-SM-5PNWA
19.7
GTEX-13JVG-0011-R10b-SM-5KM2P
19.3
GTEX-13FTZ-0011-R10b-SM-5KLZS
19.2
GTEX-12WSD-0011-R10b-SM-5GU79
19.0
GTEX-145LU-0011-R10a-SM-5PNWJ
19.0
GTEX-11WQC-0011-R10a-SM-57WCT
18.7
GTEX-147F4-0011-R10b-SM-5S2WC
18.5
GTEX-12126-0011-R10b-SM-5BC6T
17.9
GTEX-13NYB-0011-R10a-SM-5KM43
17.2
GTEX-X4EP-0011-R10B-SM-4QASJ
16.2
GTEX-ZXG5-0011-R10a-SM-57WDD
15.8
GTEX-ZUA1-0011-R10a-SM-51MT6
15.4
GTEX-ZVT3-0011-R10b-SM-57WB6
15.0
GTEX-11H98-0011-R10b-SM-5NQ98
14.9
GTEX-13SLW-0011-R10a-SM-5S2UI
14.8
GTEX-11WQK-0011-R10a-SM-5BC6R
14.4
GTEX-QVUS-0011-R10A-SM-3GIK3
14.4
GTEX-12ZZY-0011-R10b-SM-5HL7W
14.3
GTEX-QMR6-0011-R10A-SM-32PKO
13.7
GTEX-11ZUS-0011-R10b-SM-5BC79
13.3
GTEX-OXRN-0011-R10A-SM-2I5GC
13.2
GTEX-13N2G-0011-R10a-SM-5MR34
13.1
GTEX-NL4W-0011-R10A-SM-2I3DY
12.9
GTEX-13OVJ-0011-R10b-SM-5L3HT
12.6
GTEX-NPJ7-0011-R10A-SM-2I3E5
12.1
GTEX-X261-0011-R10B-SM-4E3JT
12.1
GTEX-14753-0011-R10b-SM-5S2WE
12.0
GTEX-1477Z-0011-R10b-SM-5S2RF
11.7
GTEX-1445S-0011-R10a-SM-5PNWB
11.6
GTEX-12ZZW-0011-R10b-SM-5HL9X
11.5
GTEX-139TS-0011-R10a-SM-5K7TU
11.3
GTEX-P44H-0011-R10A-SM-2XCEK
11.2
GTEX-13IVO-0011-R10a-SM-5LZY3
10.0
GTEX-13NZA-0011-R10b-SM-5KM54
8.9
GTEX-ZV68-0011-R10a-SM-51MT7
7.6
GTEX-131XW-0011-R10a-SM-5DUVA
4.7
GTEX-OXRO-0011-R10A-SM-2I5EH
4.2
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.