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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 65.8
Min RPKM: 2.1
Std RPKM: 14.6
Median RPKM: 19.3
GTEX-Y9LG-1626-SM-5IFHM
65.8
GTEX-1122O-1326-SM-5H11F
62.0
GTEX-XUZC-1426-SM-4BRV3
54.6
GTEX-YF7O-1826-SM-5IFIU
54.6
GTEX-ZTSS-0926-SM-59865
51.1
GTEX-WQUQ-2426-SM-4MVNW
48.2
GTEX-ZVZP-1826-SM-5GZXB
47.3
GTEX-YB5E-1526-SM-5IFIE
43.8
GTEX-14DAR-1426-SM-5RQIR
41.5
GTEX-131XF-1326-SM-5GCMQ
40.9
GTEX-ZPCL-1726-SM-57WEO
39.3
GTEX-11DXX-1626-SM-5H11H
37.6
GTEX-XBED-1426-SM-4AT4G
36.5
GTEX-13D11-0726-SM-5LZZB
35.4
GTEX-11EQ9-1326-SM-5985X
35.0
GTEX-111YS-1426-SM-5GID8
34.4
GTEX-ZA64-1226-SM-5HL7B
33.6
GTEX-ZTX8-0526-SM-59HLD
33.6
GTEX-ZLV1-1126-SM-4WWBW
32.8
GTEX-145LT-1026-SM-5LU9O
30.4
GTEX-1399S-2026-SM-5KM4B
30.1
GTEX-X5EB-1626-SM-4E3IV
28.8
GTEX-Y114-1426-SM-4TT6W
28.1
GTEX-ZYWO-1526-SM-5SIAL
27.4
GTEX-YEC4-1726-SM-4W21E
27.3
GTEX-ZYFG-2026-SM-5E43Y
27.2
GTEX-13CF3-1226-SM-5LZXN
26.7
GTEX-13113-1226-SM-5EGHT
26.5
GTEX-13FTW-2026-SM-5IJE2
26.2
GTEX-133LE-1426-SM-5IFH1
26.1
GTEX-11I78-1126-SM-5A5K5
25.9
GTEX-XXEK-1026-SM-4BRUW
25.7
GTEX-13PL7-2626-SM-5IFH4
25.5
GTEX-XGQ4-1326-SM-4GIDU
25.0
GTEX-ZXES-1526-SM-5NQ95
24.8
GTEX-11DXZ-1326-SM-5H11X
24.1
GTEX-1399R-2026-SM-5K7WN
22.0
GTEX-ZTPG-2626-SM-57WFX
21.9
GTEX-14E6E-1626-SM-5RQI7
21.9
GTEX-ZZ64-0526-SM-5GZXM
21.3
GTEX-12BJ1-1926-SM-5HL9Z
21.1
GTEX-13FH7-1226-SM-5IJFK
21.1
GTEX-ZLFU-1526-SM-4WWBT
20.4
GTEX-11P7K-1626-SM-5GU63
19.4
GTEX-139T6-1026-SM-5IJGC
19.2
GTEX-ZPIC-2326-SM-57WDW
19.0
GTEX-XAJ8-0526-SM-47JYK
18.8
GTEX-WH7G-1626-SM-4LVMY
17.9
GTEX-11P82-0826-SM-5P9GU
17.1
GTEX-ZVP2-1726-SM-5GU5P
16.5
GTEX-ZEX8-1826-SM-57WBH
15.8
GTEX-WFG7-1726-SM-4LVME
13.9
GTEX-13RTK-0826-SM-5Q5C6
13.4
GTEX-Y3IK-1726-SM-4YCCR
12.9
GTEX-VJYA-0926-SM-4KL1N
12.7
GTEX-XMK1-1826-SM-4B66F
12.7
GTEX-13O21-1026-SM-5IJDU
12.1
GTEX-ZVT2-2126-SM-5NQ93
12.0
GTEX-139YR-2226-SM-5IFFW
11.8
GTEX-11NSD-1726-SM-5N9C3
11.5
GTEX-WFJO-0926-SM-4LVM2
11.4
GTEX-13111-1426-SM-5DUW3
9.6
GTEX-WEY5-1526-SM-4LMJF
9.4
GTEX-13O61-1326-SM-5KM31
9.2
GTEX-ZQUD-0926-SM-57WE3
9.0
GTEX-Z9EW-0926-SM-5CVMM
9.0
GTEX-11XUK-1426-SM-5EQMG
8.4
GTEX-WFG8-1626-SM-4LVMB
8.2
GTEX-111CU-1326-SM-5NQ8L
7.9
GTEX-11VI4-1626-SM-5EQKO
7.4
GTEX-1399U-2126-SM-5IFEZ
7.4
GTEX-117YX-0326-SM-5GICL
7.3
GTEX-1192X-2526-SM-59868
7.1
GTEX-X15G-1426-SM-4PQZK
7.1
GTEX-12WSK-1526-SM-5CVNO
7.0
GTEX-WRHK-1026-SM-4MVOD
6.8
GTEX-ZF2S-1726-SM-57WFT
6.2
GTEX-131XG-1726-SM-5LZUR
6.0
GTEX-ZQG8-2526-SM-57WEQ
5.9
GTEX-13QBU-1926-SM-5IJEW
5.8
GTEX-145ME-0926-SM-5O9AR
5.4
GTEX-13OVI-1926-SM-5IJCG
4.7
GTEX-UPK5-2026-SM-4JBIM
3.9
GTEX-VUSG-1726-SM-4KKZL
3.5
GTEX-ZC5H-2326-SM-4WAYT
3.4
GTEX-ZP4G-1626-SM-57WGD
3.1
GTEX-Y5LM-1626-SM-4VDTB
3.0
GTEX-148VJ-2226-SM-5NQ9M
2.1
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.