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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 34.4
Min RPKM: 1.9
Std RPKM: 4.8
Median RPKM: 11.5
GTEX-RWSA-2026-SM-47JX8
34.4
GTEX-S4Q7-1026-SM-4AD75
23.1
GTEX-WFON-1626-SM-4LVMV
22.3
GTEX-13FTW-1226-SM-5LZZ1
22.1
GTEX-U4B1-1426-SM-4DXTX
21.1
GTEX-132NY-2826-SM-5P9G2
18.0
GTEX-QMRM-1426-SM-4R1K8
18.0
GTEX-11WQK-2726-SM-5EQMU
17.9
GTEX-139T6-1526-SM-5P9G6
17.9
GTEX-Q2AI-1126-SM-48U19
17.9
GTEX-13FXS-2826-SM-5LZYC
16.9
GTEX-XOTO-2826-SM-4B65I
16.7
GTEX-11O72-2726-SM-5HL6K
16.6
GTEX-11DYG-2526-SM-5N9BB
16.3
GTEX-UTHO-2726-SM-4JBH9
16.2
GTEX-V1D1-1926-SM-4JBGX
16.1
GTEX-WOFM-0326-SM-4OOSL
16.1
GTEX-YB5E-1826-SM-5IFI4
16.1
GTEX-YF7O-1926-SM-4W1YQ
16.1
GTEX-1399R-0526-SM-5IJEF
15.9
GTEX-SNOS-1026-SM-4DM4Y
15.9
GTEX-OIZH-2026-SM-3NB1M
15.8
GTEX-SJXC-2026-SM-4DM6N
15.8
GTEX-PLZ6-1126-SM-3P5ZR
15.7
GTEX-13FHO-2826-SM-5K7ZA
15.2
GTEX-NFK9-2226-SM-3MJGP
15.2
GTEX-ZTTD-2726-SM-57WFA
15.1
GTEX-S95S-1026-SM-4B64M
15.0
GTEX-S33H-1826-SM-4AD65
14.8
GTEX-ZZ64-0926-SM-5E44L
14.8
GTEX-WZTO-0926-SM-4PQZ3
14.3
GTEX-U412-2026-SM-4DXSI
14.2
GTEX-144GM-0826-SM-5O98R
13.9
GTEX-REY6-2126-SM-48FD9
13.6
GTEX-WFG7-1826-SM-3GIL1
13.5
GTEX-Y8E4-2126-SM-5RQHO
13.5
GTEX-ZLFU-1726-SM-4WWBU
13.5
GTEX-11NSD-0826-SM-5986S
13.4
GTEX-117YX-1526-SM-5H12T
13.2
GTEX-11TT1-2026-SM-5EQM8
13.1
GTEX-SNMC-0926-SM-4DM5U
13.1
GTEX-ZY6K-1526-SM-5GZXE
13.0
GTEX-ZT9W-1626-SM-4YCDQ
12.8
GTEX-12C56-1326-SM-5FQSV
12.5
GTEX-145LT-0626-SM-5O99E
12.5
GTEX-ZUA1-2826-SM-59HLE
12.4
GTEX-111FC-2026-SM-5GZYO
12.2
GTEX-13O61-1726-SM-5KM46
12.2
GTEX-U3ZM-0926-SM-4DXSW
12.0
GTEX-145LV-1226-SM-5S2QH
11.8
GTEX-T8EM-1826-SM-4DM7F
11.8
GTEX-ZDYS-1226-SM-5IJF3
11.7
GTEX-11OF3-1726-SM-5GU5Q
11.5
GTEX-XMK1-1026-SM-4B65H
11.5
GTEX-14BMV-2326-SM-5RQJ4
11.4
GTEX-QEG4-2226-SM-4R1JM
11.4
GTEX-11P7K-0626-SM-5985Z
11.1
GTEX-XAJ8-0626-SM-47JY4
11.1
GTEX-146FQ-1726-SM-5QGPX
11.0
GTEX-ZPU1-2026-SM-57WFI
11.0
GTEX-WH7G-1726-SM-4LVKY
10.8
GTEX-117YW-1426-SM-5EGGO
10.7
GTEX-12BJ1-1226-SM-5LUAE
10.7
GTEX-WFG8-1826-SM-4LVM4
10.7
GTEX-11TUW-2126-SM-5GU7B
10.6
GTEX-XQ3S-2526-SM-4BOOG
10.3
GTEX-Y9LG-1826-SM-4VBQC
10.3
GTEX-13O21-1126-SM-5N9EV
10.2
GTEX-13OW8-0426-SM-5J2NR
10.1
GTEX-ZTX8-1026-SM-5EGHD
10.1
GTEX-ZVP2-0826-SM-59HJ6
10.1
GTEX-111CU-1526-SM-5N9FS
10.0
GTEX-132QS-1126-SM-5P9GC
10.0
GTEX-S3XE-1326-SM-4AD4H
9.9
GTEX-1399T-1226-SM-5P9J5
9.5
GTEX-11ZUS-2126-SM-5N9E6
9.4
GTEX-QV31-1026-SM-4R1K3
9.3
GTEX-111YS-1726-SM-5GIED
9.1
GTEX-XPVG-2026-SM-4B65E
9.1
GTEX-14ABY-0726-SM-5Q5DF
9.0
GTEX-QV44-1526-SM-4R1KI
8.9
GTEX-VJYA-1226-SM-3GIJ6
8.9
GTEX-YJ8A-1126-SM-5IFJU
8.8
GTEX-11P82-1126-SM-5BC5K
8.5
GTEX-13N2G-1826-SM-5KM1I
8.4
GTEX-NPJ8-2426-SM-3MJHL
8.2
GTEX-OOBJ-2026-SM-3NB1R
7.9
GTEX-X5EB-1826-SM-4E3K8
7.8
GTEX-13NYS-1026-SM-5KLZT
7.6
GTEX-QLQ7-1326-SM-4R1JY
7.5
GTEX-U8XE-2526-SM-4E3IT
7.4
GTEX-12ZZZ-2026-SM-5LZWJ
7.3
GTEX-V955-1826-SM-4JBIL
7.0
GTEX-13G51-2326-SM-5LZXV
6.4
GTEX-RM2N-1126-SM-48FCY
6.4
GTEX-11EQ9-1726-SM-5HL6U
6.3
GTEX-14E6E-1126-SM-5S2R4
6.0
GTEX-148VJ-1826-SM-5Q5DV
5.4
GTEX-XGQ4-1826-SM-4AT6F
5.4
GTEX-13RTJ-2126-SM-5S2PZ
4.6
GTEX-131XF-1926-SM-5DUW4
4.3
GTEX-WK11-2626-SM-4OOSK
3.7
GTEX-14C5O-2826-SM-5RQI6
3.2
GTEX-13111-1326-SM-5GCNO
2.8
GTEX-OOBK-2025-SM-3LK5S
2.5
GTEX-12696-2226-SM-5EQ65
1.9
Show all
PROSTATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.