Tissue expression of FGD1 - Staining in colon

COLON - Expression summary

RNA expression

HPA:	2.6	TPM
GTEx:	2.7	RPKM
FANTOM5:	7.9	Tags Per Million

COLON - Annotated protein expression

Antibody staining	Antibody HPA000911
Endothelial cells	Not detected
Glandular cells	Not detected

COLON - HPA RNA-seq

Average TPM	2.6

Male, age 54

Sample 1
TPM: 2.1

Cell types%

Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25

Female, age 57

Sample 2
TPM: 1.8

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 80

Sample 3
TPM: 2.0

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 68

Sample 4
TPM: 2.1

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 68

Sample 5
TPM: 1.4

Cell types%

Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70

Female, age 61

Sample 6
TPM: 4.1

Cell types%

Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30

Male, age 80

Sample 7
TPM: 3.2

Cell types%

Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

Female, age 78

Sample 8
TPM: 2.5

Cell types%

Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50

Male, age 84

Sample 9
TPM: 3.2

Cell types%

Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35

Male, age 80

Sample 10
TPM: 2.1

Cell types%

Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45

Female, age 78

Sample 11
TPM: 2.7

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 69

Sample 12
TPM: 3.5

Cell types%

Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45

Female, age 72

Sample 13
TPM: 2.7

Cell types%

Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM	2.7

GTEx sample id

RPKM

Colon - Sigmoid

Colon - Sigmoid
RPKM: 3.3

Samples: 149

Max RPKM: 5.3
Min RPKM: 1.6
Std RPKM: 0.6
Median RPKM: 3.3

GTEX-1399R-2126-SM-5K7WZ

5.3

GTEX-1339X-1726-SM-5P9J9

5.1

GTEX-131XE-1026-SM-5EGKE

5.0

GTEX-131XG-1526-SM-5GCNQ

4.6

GTEX-132NY-2726-SM-5PNY2

4.6

GTEX-YECK-2826-SM-5IFHF

4.5

GTEX-ZP4G-1526-SM-57WE5

4.5

GTEX-ZPU1-1726-SM-4WWFV

4.5

Show all

Colon - Transverse

Colon - Transverse
RPKM: 2.2

Samples: 196

Max RPKM: 6.1
Min RPKM: 0.3
Std RPKM: 1
Median RPKM: 2

GTEX-U3ZH-1326-SM-4DXSF

6.1

GTEX-1339X-1626-SM-5IJDN

4.8

GTEX-XAJ8-0426-SM-47JYJ

4.7

GTEX-12WSL-1626-SM-5GCMU

4.4

GTEX-XXEK-1926-SM-4BRVD

4.4

GTEX-ZV6S-1226-SM-59HLH

4.2

GTEX-QLQ7-1126-SM-4R1KN

4.1

GTEX-11GSP-1626-SM-5986N

3.9

Show all

COLON - FANTOM5 CAGE

Average Tags Per Million	7.9

FANTOM5 sample id

Sample description

Tags Per Million

Colon
Tags Per Million: 7.9

FF:10014-101C5

62,83,84 years, mixed

7.9