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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:5.0TPM
GTEx:2.2RPKM
FANTOM5:2.3Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Chondrocytes:Not available
Peripheral nerve:Not available
 

Antibody staining

Antibody HPA023072

  

Antibody HPA023149

  

Antibody HPA027772

  

Adipocytes

 Not detected   Not detected   Low  

Fibroblasts

 Not detected   Not detected   Medium  

Chondrocytes

 Medium  

Peripheral nerve

 Medium  
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA023072

  

Antibody HPA023149

  

Antibody HPA027772

  

Adipocytes

 Not detected   Not detected   Not detected  

Fibroblasts

 Low   Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected   Medium  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

5.0
N/A Female, age 80
Sample 1
TPM: 7.0
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 4.0
N/A Female, age 57
Sample 3
TPM: 3.8
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 3.1
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 7.0
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

2.2

GTEx sample id

RPKM
0.00.10.30.00.70246810121416182022242628
 
0.00.10.30.00.70246810121416182022242628

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 0.5
Samples: 350

Max RPKM: 28.9
Min RPKM: 0
Std RPKM: 1.9
Median RPKM: 0.1
GTEX-X88G-0226-SM-4GIE4 28.9
GTEX-13FTY-0626-SM-5L3F8 9.2
GTEX-ZF3C-0226-SM-4WWB3 9.0
GTEX-ZE9C-2826-SM-5S2MO 8.5
GTEX-13NZ8-0926-SM-5MR3U 7.4
GTEX-1269C-2726-SM-5EGJ4 7.2
GTEX-Y3IK-2526-SM-4WWDM 4.9
GTEX-11ZTS-0226-SM-5EQKD 4.8
Show all
0.71.95.70.013.0051015202530354045505560
 
0.71.95.70.013.0051015202530354045505560

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 4.9
Samples: 227

Max RPKM: 61.1
Min RPKM: 0
Std RPKM: 7.9
Median RPKM: 1.9
GTEX-ZXG5-1626-SM-59HJK 61.1
GTEX-11OF3-0826-SM-5BC51 39.3
GTEX-ZF3C-1026-SM-5S2OC 31.7
GTEX-ZE7O-1526-SM-5J1NH 31.6
GTEX-11ZTS-1326-SM-5EQMA 31.4
GTEX-ZE9C-1326-SM-5S2OW 31.2
GTEX-13S86-0926-SM-5SI6I 28.7
GTEX-XOT4-0826-SM-4B66Y 27.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

2.3

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 2.3
FF:10010-101C1 65,65,76 years, mixed 2.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.