Tissue expression of SLC39A3 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	19.1	TPM
GTEx:	7.5	RPKM
FANTOM5:	9.0	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Medium

Antibody staining	Antibody HPA042139	Antibody HPA058526
Squamous epithelial cells	Medium	Medium

ESOPHAGUS - HPA RNA-seq

Average TPM	19.1

Female, age 70

Sample 1
TPM: 26.6

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 14.7

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 16.0

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	7.5

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 7.5

Samples: 286

Max RPKM: 15.2
Min RPKM: 3
Std RPKM: 2.1
Median RPKM: 7

GTEX-TSE9-1226-SM-4DXTM

15.2

GTEX-144GO-2726-SM-5O9A2

14.8

GTEX-R45C-1226-SM-48FEE

13.8

GTEX-RNOR-1226-SM-48FDQ

13.4

GTEX-R3RS-1326-SM-48FE7

13.3

GTEX-X4XY-1726-SM-46MVO

12.9

GTEX-13PVQ-1726-SM-5IFF3

12.8

GTEX-R55D-1126-SM-48FEB

12.8

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	9.0

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 9.0

FF:10015-101C6

68,74,75 years, mixed

9.0