Tissue expression of NBPF3 - Staining in adipose tissue - The Human Protein Atlas

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NBPF3

TISSUE

CELL

CANCER

TISSUE ATLAS PRIMARY DATA ADIPOSE TISSUE

GENE/PROTEIN

Antibody validation

Dictionary
	Soft tissue


Tissue proteome
	Adipose

SOFT TISSUE - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	1.4	TPM
GTEx:	1.3	RPKM
FANTOM5:	3.4	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA042595		Antibody HPA043692		Antibody HPA044023		Antibody HPA046971		Antibody HPA058050
Adipocytes	Not detected		Not detected		Not detected		Not detected		Not detected
Fibroblasts	Not detected		Not detected		Not detected		Not detected		Not detected
Peripheral nerve	Medium		Not detected		Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not available
Peripheral nerve:	Not available

Antibody staining	Antibody HPA042595		Antibody HPA043692		Antibody HPA044023		Antibody HPA046971		Antibody HPA058050
Adipocytes	Low		Not detected		Not detected		Not detected		Not detected
Fibroblasts	Not detected		Not detected		Not detected		Not detected
Peripheral nerve	Not detected		Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	1.4

N/A

Female, age 80

Sample 1
TPM: 0.9

Cell types%

Adipocytes: 95
Other cell types: 5

N/A

Female, age 45

Sample 2
TPM: 1.6

N/A

Female, age 57

Sample 3
TPM: 2.4

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 74

Sample 4
TPM: 1.3

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 59

Sample 5
TPM: 0.7

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	1.3

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 1.3

Samples: 350

Max RPKM: 4.1
Min RPKM: 0.2
Std RPKM: 0.6
Median RPKM: 1.3

GTEX-PX3G-0226-SM-3NB2C

4.1

GTEX-TMZS-0226-SM-3DB9N

3.7

GTEX-T2IS-0226-SM-32QPH

3.6

GTEX-11GSO-2326-SM-5A5LX

3.3

GTEX-13N11-2626-SM-5K7UQ

3.3

GTEX-13D11-2326-SM-5IJCY

2.9

GTEX-Q2AI-1426-SM-2S1P5

2.9

GTEX-WY7C-2426-SM-3NB2V

2.9

Show all

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 1.2

Samples: 227

Max RPKM: 4.4
Min RPKM: 0.1
Std RPKM: 0.6
Median RPKM: 1.1

GTEX-W5X1-1426-SM-3GIKH

4.4

GTEX-Y5V5-0226-SM-5S2N8

3.1

GTEX-ZYFC-1826-SM-5GZZA

3.1

GTEX-131YS-1726-SM-5HL7G

2.9

GTEX-13N11-1826-SM-5IJDS

2.9

GTEX-139YR-0326-SM-5J1MC

2.8

GTEX-WHWD-0826-SM-3LK6R

2.8

GTEX-12WSG-0426-SM-5FQSE

2.5

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	3.4

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 3.4

65,65,76 years, mixed

3.4

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.