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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:23.3TPM
GTEx:26.5RPKM
FANTOM5:42.7Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA004125

 

Antibody CAB017097

 

Glandular cells

Medium   High  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

23.3

overview Male, age 65
Sample 1
TPM: 20.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 23.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 25.2
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 23.5

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

26.5

GTEx sample id

RPKM

21.424.930.78.441.40510152025303540455055
 
21.424.930.78.441.40510152025303540455055

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 26.5
Samples: 88

Max RPKM: 58.6
Min RPKM: 8.4
Std RPKM: 8.4
Median RPKM: 24.8
GTEX-VJYA-0926-SM-4KL1N 58.6
GTEX-UPK5-2026-SM-4JBIM 54.1
GTEX-X15G-1426-SM-4PQZK 49.0
GTEX-VUSG-1726-SM-4KKZL 48.3
GTEX-131XG-1726-SM-5LZUR 41.4
GTEX-ZVP2-1726-SM-5GU5P 38.2
GTEX-13O61-1326-SM-5KM31 37.9
GTEX-11VI4-1626-SM-5EQKO 36.7
GTEX-11NSD-1726-SM-5N9C3 36.5
GTEX-Z9EW-0926-SM-5CVMM 36.2
GTEX-XAJ8-0526-SM-47JYK 33.8
GTEX-13CF3-1226-SM-5LZXN 33.1
GTEX-1399U-2126-SM-5IFEZ 33.1
GTEX-WH7G-1626-SM-4LVMY 32.7
GTEX-ZC5H-2326-SM-4WAYT 32.6
GTEX-ZEX8-1826-SM-57WBH 32.3
GTEX-ZLFU-1526-SM-4WWBT 32.1
GTEX-WEY5-1526-SM-4LMJF 31.6
GTEX-13111-1426-SM-5DUW3 31.3
GTEX-XXEK-1026-SM-4BRUW 31.1
GTEX-11P82-0826-SM-5P9GU 31.0
GTEX-XGQ4-1326-SM-4GIDU 30.8
GTEX-111CU-1326-SM-5NQ8L 30.7
GTEX-WFJO-0926-SM-4LVM2 30.6
GTEX-WFG8-1626-SM-4LVMB 30.3
GTEX-12BJ1-1926-SM-5HL9Z 30.2
GTEX-148VJ-2226-SM-5NQ9M 29.8
GTEX-13FH7-1226-SM-5IJFK 29.7
GTEX-ZQG8-2526-SM-57WEQ 29.5
GTEX-ZP4G-1626-SM-57WGD 29.0
GTEX-145ME-0926-SM-5O9AR 28.7
GTEX-ZQUD-0926-SM-57WE3 28.2
GTEX-13RTK-0826-SM-5Q5C6 28.2
GTEX-11XUK-1426-SM-5EQMG 27.9
GTEX-WRHK-1026-SM-4MVOD 27.6
GTEX-13FTW-2026-SM-5IJE2 27.0
GTEX-133LE-1426-SM-5IFH1 26.3
GTEX-117YX-0326-SM-5GICL 26.1
GTEX-Y5LM-1626-SM-4VDTB 25.7
GTEX-XBED-1426-SM-4AT4G 25.7
GTEX-ZVT2-2126-SM-5NQ93 25.6
GTEX-11I78-1126-SM-5A5K5 25.5
GTEX-XUZC-1426-SM-4BRV3 25.2
GTEX-11DXX-1626-SM-5H11H 25.1
GTEX-Y114-1426-SM-4TT6W 24.6
GTEX-1399S-2026-SM-5KM4B 24.6
GTEX-ZF2S-1726-SM-57WFT 24.0
GTEX-14E6E-1626-SM-5RQI7 23.9
GTEX-13QBU-1926-SM-5IJEW 23.9
GTEX-11EQ9-1326-SM-5985X 23.8
GTEX-12WSK-1526-SM-5CVNO 23.6
GTEX-139YR-2226-SM-5IFFW 23.6
GTEX-11P7K-1626-SM-5GU63 23.0
GTEX-131XF-1326-SM-5GCMQ 22.9
GTEX-ZPIC-2326-SM-57WDW 22.9
GTEX-139T6-1026-SM-5IJGC 22.9
GTEX-WQUQ-2426-SM-4MVNW 22.7
GTEX-145LT-1026-SM-5LU9O 22.6
GTEX-Y3IK-1726-SM-4YCCR 22.3
GTEX-ZZ64-0526-SM-5GZXM 22.0
GTEX-1192X-2526-SM-59868 22.0
GTEX-XMK1-1826-SM-4B66F 21.9
GTEX-ZYFG-2026-SM-5E43Y 21.6
GTEX-ZVZP-1826-SM-5GZXB 21.5
GTEX-ZLV1-1126-SM-4WWBW 21.5
GTEX-WFG7-1726-SM-4LVME 21.4
GTEX-ZTPG-2626-SM-57WFX 21.4
GTEX-ZYWO-1526-SM-5SIAL 21.3
GTEX-YB5E-1526-SM-5IFIE 20.7
GTEX-ZTSS-0926-SM-59865 20.7
GTEX-ZTX8-0526-SM-59HLD 20.0
GTEX-13OVI-1926-SM-5IJCG 19.8
GTEX-13D11-0726-SM-5LZZB 19.5
GTEX-1399R-2026-SM-5K7WN 19.1
GTEX-11DXZ-1326-SM-5H11X 19.1
GTEX-ZPCL-1726-SM-57WEO 18.1
GTEX-X5EB-1626-SM-4E3IV 18.0
GTEX-14DAR-1426-SM-5RQIR 18.0
GTEX-13113-1226-SM-5EGHT 17.3
GTEX-ZA64-1226-SM-5HL7B 17.2
GTEX-YF7O-1826-SM-5IFIU 17.1
GTEX-ZXES-1526-SM-5NQ95 16.5
GTEX-13PL7-2626-SM-5IFH4 16.4
GTEX-13O21-1026-SM-5IJDU 16.2
GTEX-1122O-1326-SM-5H11F 15.8
GTEX-YEC4-1726-SM-4W21E 15.8
GTEX-Y9LG-1626-SM-5IFHM 14.5
GTEX-111YS-1426-SM-5GID8 8.4
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

42.7

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 42.7
FF:10024-101D6 15,40,85 years, mixed 42.7

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The Human Protein Atlas project is funded
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