Tissue expression of MAP6D1 - Summary - The Human Protein Atlas

GENERAL INFORMATION
Gene name	MAP6D1
Gene description	MAP6 domain containing 1
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	2
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Group enriched (cerebral cortex, skeletal muscle)
GTEx:	Group enriched (cerebellum, hippocampus, cerebral cortex, caudate, hypothalamus)
FANTOM5:	Group enriched (cerebellum, brain, hippocampus, caudate)

Protein evidence

Evidence at protein level

DATA RELIABILITY
Reliability score	Pending normal tissue annotation.

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

N/A

Cerebral cortex

N/A

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

N/A

Thyroid gland

N/A

Parathyroid gland

N/A

Adrenal gland

N/A

Bone marrow & immune system

N/A

Appendix

N/A

Bone marrow

N/A

Lymph node

N/A

Tonsil

N/A

Spleen

N/A

Muscle tissues

N/A

Heart muscle

N/A

Skeletal muscle

N/A

Smooth muscle

N/A

Lung

N/A

Nasopharynx

N/A

Bronchus

N/A

Lung

N/A

Liver & gallbladder

N/A

Liver

N/A

Gallbladder

N/A

Pancreas

N/A

Pancreas

N/A

Gastrointestinal tract

N/A

Oral mucosa

N/A

Salivary gland

N/A

Esophagus

N/A

Stomach

N/A

Duodenum

N/A

Small intestine

N/A

Colon

N/A

Rectum

N/A

Kidney & urinary bladder

N/A

Kidney

N/A

Urinary bladder

N/A

Male tissues

N/A

Testis

N/A

Epididymis

N/A

Prostate

N/A

Seminal vesicle

N/A

Female tissues

N/A

Breast

N/A

Vagina

N/A

Cervix, uterine

N/A

Endometrium

N/A

Fallopian tube

N/A

Ovary

N/A

Placenta

N/A

Adipose & soft tissue

N/A

Adipose tissue

N/A

Soft tissue

N/A

Skin

N/A

Skin

N/A

PROTEIN EXPRESSION OVERVIEW
Pending normal tissue annotation.

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Group enriched (cerebral cortex, skeletal muscle)
GTEx dataset Organ Expression Alphabetical RNA tissue category: Group enriched (cerebellum, hippocampus, cerebral cortex, caudate, hypothalamus)
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Group enriched (cerebellum, brain, hippocampus, caudate)

GENE INFORMATION
Gene name	MAP6D1 (HGNC Symbol)
Synonyms	FLJ12748, SL21
Description	MAP6 domain containing 1 (HGNC Symbol)
Entrez gene summary	This gene encodes a protein highly similar to the mouse MAP6 domain containing 1 protein, which is related to the STOP proteins. Based on the study of the mouse protein, the encoded protein may function as a calmodulin-regulated neuronal protein that binds and stabilizes microtubules but also associates with the Golgi membranes through N-terminal palmitoylation. [provided by RefSeq, Oct 2008]
Chromosome	3
Cytoband	q27.1
Chromosome location (bp)	183815876 - 183825594
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000180834 (version 83.38)
Entrez gene	79929
UniProt	Q9H9H5 (UniProt - Evidence at protein level)
neXtProt	NX_Q9H9H5
Antibodypedia	MAP6D1 antibodies

PROTEIN BROWSER

MAP6D1-001	MAP6D1-002

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
MAP6D1-001 ENSP00000314560 ENST00000318631	Q9H9H5 [Direct mapping] MAP6 domain-containing protein 1 Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0000226 [microtubule cytoskeleton organization] GO:0005516 [calmodulin binding] GO:0005798 [Golgi-associated vesicle] GO:0005801 [cis-Golgi network] GO:0005874 [microtubule] GO:0007026 [negative regulation of microtubule depolymerization] GO:0008017 [microtubule binding] GO:0018009 [N-terminal peptidyl-L-cysteine N-palmitoylation] Show all	199 aa 21 kDa	No	0
MAP6D1-002 ENSP00000388945 ENST00000431348	C9JPF8 [Direct mapping] MAP6 domain containing 1, isoform CRA_b; MAP6 domain-containing protein 1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0000226 [microtubule cytoskeleton organization] GO:0005516 [calmodulin binding] GO:0005874 [microtubule] GO:0008017 [microtubule binding] Show all	182 aa 19.1 kDa	No	0