Tissue expression of SYNM - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	192.7	TPM
GTEx:	25.7	RPKM
FANTOM5:	260.9	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Not detected

Antibody staining	Antibody HPA040066	Antibody HPA044200	Antibody CAB017192
Squamous epithelial cells	Not detected	Not detected	Not detected

ESOPHAGUS - HPA RNA-seq

Average TPM	192.7

Female, age 70

Sample 1
TPM: 60.8

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 361.2

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 156.3

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	25.7

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 25.7

Samples: 286

Max RPKM: 239
Min RPKM: 1.4
Std RPKM: 23.2
Median RPKM: 21.2

GTEX-WEY5-0926-SM-4LMI4

239.0

GTEX-11VI4-0526-SM-5EQ48

161.1

GTEX-13O21-0626-SM-5IJDI

101.7

GTEX-13X6K-2126-SM-5O9D4

89.2

GTEX-ZAB5-0926-SM-5CVMV

88.6

GTEX-ZYW4-1326-SM-5E45N

77.9

GTEX-111CU-0726-SM-5GZYD

73.1

GTEX-13W3W-1626-SM-5LU35

70.0

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	260.9

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 260.9

FF:10015-101C6

68,74,75 years, mixed

260.9