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SEPT9

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:73.9TPM
GTEx:14.9RPKM
FANTOM5:109.0Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Low
Peripheral nerve:Low
 
 

Antibody staining

Antibody HPA042564

  

Adipocytes

 Not detected  

Fibroblasts

 Low  

Peripheral nerve

 Low  
    
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Low
Fibroblasts:Medium
Peripheral nerve:Low
 

Antibody staining

Antibody HPA042564

  

Adipocytes

 Not detected  

Chondrocytes

 Low  

Fibroblasts

 Medium  

Peripheral nerve

 Low  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

73.9
N/A Female, age 80
Sample 1
TPM: 85.4
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 52.8
N/A Female, age 57
Sample 3
TPM: 43.3
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 121.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 66.4
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

14.9

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 15.5
Samples: 350

Max RPKM: 37.4
Min RPKM: 4.7
Std RPKM: 4.3
Median RPKM: 15.3
GTEX-13OW6-0526-SM-5L3HY 37.4
GTEX-X4XY-0326-SM-46MVZ 34.9
GTEX-ZYVF-0226-SM-5GIEG 34.7
GTEX-13O1R-0226-SM-5K7U5 26.9
GTEX-YECK-0226-SM-4W215 25.8
GTEX-OOBJ-0226-SM-2YUMM 25.3
GTEX-13111-1726-SM-5EGJZ 24.5
GTEX-139T4-0126-SM-5HL5G 24.5
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 14.0
Samples: 227

Max RPKM: 27.9
Min RPKM: 6.8
Std RPKM: 3.4
Median RPKM: 13.7
GTEX-ZYVF-1026-SM-5E44V 27.9
GTEX-13OW7-1126-SM-5K7V6 26.5
GTEX-U8XE-1926-SM-3DB98 24.8
GTEX-13OVH-1126-SM-5K7YP 22.6
GTEX-133LE-0926-SM-5P9J1 21.9
GTEX-Y5LM-0826-SM-4VDSW 21.8
GTEX-11DXX-2026-SM-5EGJL 21.7
GTEX-11DXZ-1426-SM-5H12A 20.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

109.0

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 109.0
FF:10010-101C1 65,65,76 years, mixed 109.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.