Gene Gene synonym Ensembl Gene description Chromosome Position Protein class Evidence HPA evidence UniProt evidence MS evidence Antibody Reliability (IH) Reliability (Mouse Brain) Reliability (IF) Subcellular location RNA tissue category RNA TS RNA TS TPM TPM max in non-specific BBX HBP2, HSPC339, MDS001 ENSG00000114439 Bobby sox homolog (Drosophila) 3 107522936-107811324 Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level HPA006049, HPA050646 Supported Validated Nucleoplasm
Cytosol Expressed in all testis: 115.3 CIC KIAA0306 ENSG00000079432 Capicua transcriptional repressor 19 42268537-42295797 Cancer-related genes, Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level CAB026388, HPA044341, HPA064725 Approved Supported Nucleoplasm
Vesicles Expressed in all testis: 55.0 HBP1 ENSG00000105856 HMG-box transcription factor 1 7 107168961-107202529 Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level HPA020225, CAB032824 Approved Validated Nuclear speckles Expressed in all thyroid gland: 108.7 HMG20A FLJ10739, HMGX1, HMGXB1 ENSG00000140382 High mobility group 20A 15 77420412-77485607 Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level HPA008126 Supported Approved Nucleus Expressed in all spleen: 49.8 HMG20B BRAF25, BRAF35, HMGX2, HMGXB2, SMARCE1r, SOXL ENSG00000064961 High mobility group 20B 19 3572777-3579088 Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level HPA050220, HPA053157, HPA069832 Approved Validated Nucleoplasm Expressed in all prostate: 64.9 HMGXB3 HMGX3, KIAA0194, SMF ENSG00000113716 HMG box domain containing 3 5 150000046-150053142 Plasma proteins, Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at transcript level Evidence at transcript level Evidence at protein level HPA005967 Approved Nucleoli Tissue enriched 11 parathyroid gland: 278.2 prostate: 26.2 HMGXB4 HMG2L1, THC211630 ENSG00000100281 HMG box domain containing 4 22 35257452-35295807 Cancer-related genes, Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at transcript level Evidence at protein level Evidence at protein level HPA000725 Approved Expressed in all endometrium: 18.7 LEF1 TCF10, TCF1ALPHA, TCF7L3 ENSG00000138795 Lymphoid enhancer-binding factor 1 4 108047545-108168956 Plasma proteins, Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at transcript level Evidence at protein level Evidence at protein level HPA002087, CAB019405 Approved Approved Nucleoplasm
Nuclear bodies
Cytosol Tissue enhanced 0 lymph node: 42.2 tonsil: 29.3 NFYA CBF-B, HAP2, NF-YA ENSG00000001167 Nuclear transcription factor Y, alpha 6 41072945-41099976 Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level CAB009250, HPA050779 Supported Supported Nucleoplasm Expressed in all testis: 71.0 NFYB CBF-A, HAP3, NF-YB ENSG00000120837 Nuclear transcription factor Y, beta 12 104117077-104138289 Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level CAB004211 Supported Supported Nucleoplasm Expressed in all seminal vesicle: 122.9 NFYC CBF-C, NF-YC ENSG00000066136 Nuclear transcription factor Y, gamma 1 40691570-40771603 Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level HPA055011 Supported Nucleoplasm Expressed in all thyroid gland: 60.0 PBRM1 BAF180, PB1 ENSG00000163939 Polybromo 1 3 52545352-52685917 Cancer-related genes, Disease related genes, Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level HPA015629, HPA059373 Uncertain Supported Nucleoplasm Expressed in all thyroid gland: 44.5 SMARCE1 BAF57 ENSG00000073584 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 17 40624962-40648508 Cancer-related genes, Disease related genes, Plasma proteins, Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level HPA003916, CAB037318 Supported Supported Nucleoplasm Expressed in all endometrium: 72.9 SOX10 DOM, WS2E, WS4 ENSG00000100146 SRY (sex determining region Y)-box 10 22 37970686-37987422 Disease related genes, Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level CAB003171, HPA068898 Supported Supported Nucleoplasm Tissue enhanced 0 cerebral cortex: 56.8;salivary gland: 50.8 breast: 24.0 SOX11 ENSG00000176887 SRY (sex determining region Y)-box 11 2 5692667-5701385 Disease related genes, Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at transcript level Evidence at protein level Evidence at protein level HPA000536, CAB056152, CAB056153 Approved Tissue enriched 14 cerebral cortex: 5.4 smooth muscle: 0.3 SOX12 SOX22 ENSG00000177732 SRY (sex determining region Y)-box 12 20 325401-330224 Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at transcript level Evidence at protein level HPA055052, HPA061627 Supported Nucleoplasm Mixed cerebral cortex: 10.3 SOX13 ICA12, MGC117216, Sox-13 ENSG00000143842 SRY (sex determining region Y)-box 13 1 204073115-204127743 Plasma proteins, Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level HPA051790, HPA054843 Validated Nucleoplasm Mixed parathyroid gland: 52.4 SOX15 SOX20, SOX26, SOX27 ENSG00000129194 SRY (sex determining region Y)-box 15 17 7588178-7590170 Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level HPA067196, HPA074049 Supported Supported Nucleus
Nucleoli
Golgi apparatus
Vesicles Tissue enhanced 0 skin: 40.6 esophagus: 17.5 SOX17 ENSG00000164736 SRY (sex determining region Y)-box 17 8 54457935-54460888 Cancer-related genes, Disease related genes, Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level CAB025594, HPA068399 Supported Approved Nucleoplasm Tissue enhanced 0 cervix, uterine: 30.1;endometrium: 32.1;fallopian tube: 30.1 adipose tissue: 14.7 SOX18 ENSG00000203883 SRY (sex determining region Y)-box 18 20 64047582-64049641 Disease related genes, Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at transcript level Evidence at protein level HPA073703 Approved Nucleus Tissue enhanced 0 adipose tissue: 32.9 lung: 12.0 SOX2 ENSG00000181449 SRY (sex determining region Y)-box 2 3 181711924-181714436 Cancer-related genes, Disease related genes, Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level CAB010648, HPA045725 Approved Supported Nucleoplasm Tissue enriched 8 cerebral cortex: 118.3 esophagus: 14.9 SOX21 SOX25 ENSG00000125285 SRY (sex determining region Y)-box 21 13 94709622-94712399 Predicted intracellular proteins, Transcription factors Evidence at transcript level Evidence at transcript level Evidence at transcript level HPA064084 Approved Nucleus Group enriched 6 cerebral cortex: 18.0;esophagus: 6.9;skin: 19.4;stomach: 33.9 tonsil: 3.2 SOX3 PHP ENSG00000134595 SRY (sex determining region Y)-box 3 X 140502987-140505503 Disease related genes, Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level HPA054720, HPA075003 Validated Nucleoplasm Tissue enriched 7 fallopian tube: 11.7 testis: 1.7 SOX30 ENSG00000039600 SRY (sex determining region Y)-box 30 5 157625679-157671480 Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level HPA006159, CAB009382 Supported Tissue enriched 90 testis: 144.0 fallopian tube: 1.6 SOX4 ENSG00000124766 SRY (sex determining region Y)-box 4 6 21592769-21598619 Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level HPA029901 Approved Supported Nucleoplasm
Mitochondria Expressed in all endometrium: 80.4 SOX5 L-SOX5, MGC35153 ENSG00000134532 SRY (sex determining region Y)-box 5 12 23529500-23951032 Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level HPA060499 Supported Nucleoplasm Tissue enhanced 0 testis: 58.3 cerebral cortex: 11.7 SOX6 ENSG00000110693 SRY (sex determining region Y)-box 6 11 15966449-16739591 Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level HPA001923, HPA003908 Approved Approved Nucleoplasm Tissue enhanced 0 testis: 25.8 bone marrow: 16.6 SOX7 ENSG00000171056 SRY (sex determining region Y)-box 7 8 10723768-10730512 Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level HPA009065 Approved Approved Nuclear speckles
Golgi apparatus Tissue enhanced 0 placenta: 49.2 lung: 18.7 SOX8 ENSG00000005513 SRY (sex determining region Y)-box 8 16 981808-986979 Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at transcript level HPA041640, HPA058665 Approved Supported Nucleus Tissue enriched 29 cerebral cortex: 110.2 salivary gland: 3.8 SOX9 CMD1, CMPD1, SRA1 ENSG00000125398 SRY (sex determining region Y)-box 9 17 72121020-72126420 Cancer-related genes, Disease related genes, Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level HPA001758, CAB022456, CAB068240 Supported Validated Nucleoplasm Mixed cerebral cortex: 61.5 SSRP1 FACT80 ENSG00000149136 Structure specific recognition protein 1 11 57325985-57335877 Plasma proteins, Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at transcript level Evidence at protein level Evidence at protein level HPA002697 Approved Approved Nucleus
Cytosol Expressed in all parathyroid gland: 122.9 TAF1 BA2R, CCG1, CCGS, DYT3, DYT3/TAF1, KAT4, NSCL2, TAF2A, TAFII250 ENSG00000147133 TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa X 71366239-71532374 Cancer-related genes, Disease related genes, Enzymes, Potential drug targets, Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level HPA001075, CAB016283 Supported Validated Nucleoplasm Expressed in all parathyroid gland: 25.7 TCF7 TCF-1 ENSG00000081059 Transcription factor 7 (T-cell specific, HMG-box) 5 134114711-134151865 Cancer-related genes, Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level CAB019403, HPA058863, HPA070505 Supported Validated Nucleoplasm Tissue enhanced 0 lymph node: 111.6 appendix: 74.8 TCF7L1 TCF3 ENSG00000152284 Transcription factor 7-like 1 (T-cell specific, HMG-box) 2 85133410-85310388 Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at transcript level Evidence at protein level HPA071298 Supported Nucleoplasm
Cytosol Mixed endometrium: 22.8 TCF7L2 TCF-4, TCF4 ENSG00000148737 Transcription factor 7-like 2 (T-cell specific, HMG-box) 10 112950250-113167678 Cancer-related genes, Disease related genes, Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level CAB013535, HPA038800 Supported Supported Nucleoplasm
Nuclear bodies Expressed in all endometrium: 33.6 TFAM TCF6, TCF6L2 ENSG00000108064 Transcription factor A, mitochondrial 10 58385022-58399221 Predicted intracellular proteins, Predicted secreted proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level HPA040648, HPA063684 Supported Validated Mitochondria Expressed in all testis: 62.0 TOX KIAA0808, TOX1 ENSG00000198846 Thymocyte selection-associated high mobility group box 8 58805418-59119208 Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at transcript level Evidence at protein level HPA018322, HPA073241 Supported Approved Nucleus
Nucleoli fibrillar center Mixed lymph node: 21.3 TOX2 C20orf100, dJ1108D11.2, GCX-1 ENSG00000124191 TOX high mobility group box family member 2 20 43914864-44069616 Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at transcript level Evidence at protein level HPA049900, HPA058396 Approved Supported Nucleoplasm Mixed parathyroid gland: 19.5 TOX3 CAGF9, TNRC9 ENSG00000103460 TOX high mobility group box family member 3 16 52438005-52547802 Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at transcript level Evidence at protein level HPA040376 Approved Approved Nucleoplasm Mixed stomach: 18.0 TOX4 C14orf92, KIAA0737, LCP1 ENSG00000092203 TOX high mobility group box family member 4 14 21476597-21499175 Plasma proteins, Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at transcript level Evidence at protein level Evidence at protein level HPA017880, HPA027551 Approved Approved Nucleus
Nucleoli
Vesicles Expressed in all parathyroid gland: 34.8 UBTF NOR-90, UBF, UBF1, UBF2 ENSG00000108312 Upstream binding transcription factor, RNA polymerase I 17 44205033-44221626 Plasma proteins, Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level CAB004611, HPA006385 Supported Supported Validated Nucleoli fibrillar center Expressed in all lymph node: 82.3 WHSC1 MMSET, NSD2 ENSG00000109685 Wolf-Hirschhorn syndrome candidate 1 4 1871424-1982207 Cancer-related genes, Disease related genes, Enzymes, Potential drug targets, Predicted intracellular proteins, Transcription factors Evidence at protein level Evidence at protein level Evidence at protein level Evidence at protein level HPA015801, CAB068246, CAB068247 Supported Supported Nucleus Expressed in all testis: 66.9