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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 18.2
Min RPKM: 5.3
Std RPKM: 2.6
Median RPKM: 11
GTEX-ZY6K-1526-SM-5GZXE
18.2
GTEX-X5EB-1826-SM-4E3K8
17.1
GTEX-11TUW-2126-SM-5GU7B
16.3
GTEX-ZT9W-1626-SM-4YCDQ
15.8
GTEX-11WQK-2726-SM-5EQMU
15.0
GTEX-132QS-1126-SM-5P9GC
15.0
GTEX-Q2AI-1126-SM-48U19
15.0
GTEX-WH7G-1726-SM-4LVKY
14.9
GTEX-QV31-1026-SM-4R1K3
14.5
GTEX-OIZH-2026-SM-3NB1M
14.4
GTEX-WFG7-1826-SM-3GIL1
14.4
GTEX-13FTW-1226-SM-5LZZ1
14.3
GTEX-U3ZM-0926-SM-4DXSW
14.2
GTEX-YF7O-1926-SM-4W1YQ
14.2
GTEX-YB5E-1826-SM-5IFI4
14.1
GTEX-S4Q7-1026-SM-4AD75
14.0
GTEX-SNOS-1026-SM-4DM4Y
14.0
GTEX-VJYA-1226-SM-3GIJ6
13.9
GTEX-XMK1-1026-SM-4B65H
13.9
GTEX-145LV-1226-SM-5S2QH
13.7
GTEX-ZUA1-2826-SM-59HLE
13.5
GTEX-11P82-1126-SM-5BC5K
13.4
GTEX-S95S-1026-SM-4B64M
13.3
GTEX-SNMC-0926-SM-4DM5U
13.1
GTEX-14E6E-1126-SM-5S2R4
13.0
GTEX-111CU-1526-SM-5N9FS
12.9
GTEX-139T6-1526-SM-5P9G6
12.8
GTEX-WFG8-1826-SM-4LVM4
12.8
GTEX-ZVP2-0826-SM-59HJ6
12.8
GTEX-V1D1-1926-SM-4JBGX
12.6
GTEX-ZTX8-1026-SM-5EGHD
12.6
GTEX-ZDYS-1226-SM-5IJF3
12.5
GTEX-12C56-1326-SM-5FQSV
12.4
GTEX-146FQ-1726-SM-5QGPX
12.4
GTEX-11TT1-2026-SM-5EQM8
12.3
GTEX-U8XE-2526-SM-4E3IT
12.3
GTEX-S33H-1826-SM-4AD65
12.1
GTEX-145LT-0626-SM-5O99E
11.8
GTEX-S3XE-1326-SM-4AD4H
11.8
GTEX-Y9LG-1826-SM-4VBQC
11.8
GTEX-13O61-1726-SM-5KM46
11.7
GTEX-WZTO-0926-SM-4PQZ3
11.7
GTEX-XQ3S-2526-SM-4BOOG
11.5
GTEX-ZPU1-2026-SM-57WFI
11.5
GTEX-117YX-1526-SM-5H12T
11.4
GTEX-QLQ7-1326-SM-4R1JY
11.4
GTEX-ZZ64-0926-SM-5E44L
11.4
GTEX-RM2N-1126-SM-48FCY
11.3
GTEX-12696-2226-SM-5EQ65
11.2
GTEX-SJXC-2026-SM-4DM6N
11.2
GTEX-V955-1826-SM-4JBIL
11.2
GTEX-OOBJ-2026-SM-3NB1R
11.1
GTEX-13FXS-2826-SM-5LZYC
11.0
GTEX-148VJ-1826-SM-5Q5DV
11.0
GTEX-XPVG-2026-SM-4B65E
11.0
GTEX-ZTTD-2726-SM-57WFA
11.0
GTEX-NFK9-2226-SM-3MJGP
10.9
GTEX-WOFM-0326-SM-4OOSL
10.9
GTEX-QMRM-1426-SM-4R1K8
10.7
GTEX-OOBK-2025-SM-3LK5S
10.6
GTEX-144GM-0826-SM-5O98R
10.5
GTEX-U4B1-1426-SM-4DXTX
10.3
GTEX-14ABY-0726-SM-5Q5DF
10.1
GTEX-XOTO-2826-SM-4B65I
10.1
GTEX-111FC-2026-SM-5GZYO
10.0
GTEX-Y8E4-2126-SM-5RQHO
10.0
GTEX-REY6-2126-SM-48FD9
9.9
GTEX-12BJ1-1226-SM-5LUAE
9.8
GTEX-11P7K-0626-SM-5985Z
9.6
GTEX-12ZZZ-2026-SM-5LZWJ
9.6
GTEX-14BMV-2326-SM-5RQJ4
9.6
GTEX-111YS-1726-SM-5GIED
9.5
GTEX-11O72-2726-SM-5HL6K
9.5
GTEX-11EQ9-1726-SM-5HL6U
9.4
GTEX-NPJ8-2426-SM-3MJHL
9.4
GTEX-PLZ6-1126-SM-3P5ZR
9.4
GTEX-11NSD-0826-SM-5986S
9.3
GTEX-RWSA-2026-SM-47JX8
9.3
GTEX-U412-2026-SM-4DXSI
9.1
GTEX-T8EM-1826-SM-4DM7F
8.9
GTEX-XGQ4-1826-SM-4AT6F
8.9
GTEX-YJ8A-1126-SM-5IFJU
8.8
GTEX-ZLFU-1726-SM-4WWBU
8.7
GTEX-132NY-2826-SM-5P9G2
8.5
GTEX-13FHO-2826-SM-5K7ZA
8.4
GTEX-13O21-1126-SM-5N9EV
8.3
GTEX-QEG4-2226-SM-4R1JM
8.3
GTEX-XAJ8-0626-SM-47JY4
8.3
GTEX-1399R-0526-SM-5IJEF
8.2
GTEX-1399T-1226-SM-5P9J5
8.1
GTEX-11ZUS-2126-SM-5N9E6
8.0
GTEX-13OW8-0426-SM-5J2NR
8.0
GTEX-WFON-1626-SM-4LVMV
7.9
GTEX-UTHO-2726-SM-4JBH9
7.8
GTEX-131XF-1926-SM-5DUW4
7.6
GTEX-QV44-1526-SM-4R1KI
7.6
GTEX-11DYG-2526-SM-5N9BB
7.5
GTEX-117YW-1426-SM-5EGGO
7.3
GTEX-13111-1326-SM-5GCNO
7.2
GTEX-11OF3-1726-SM-5GU5Q
7.0
GTEX-13N2G-1826-SM-5KM1I
7.0
GTEX-14C5O-2826-SM-5RQI6
6.4
GTEX-13NYS-1026-SM-5KLZT
6.1
GTEX-13G51-2326-SM-5LZXV
5.8
GTEX-WK11-2626-SM-4OOSK
5.8
GTEX-13RTJ-2126-SM-5S2PZ
5.3
Show all
PROSTATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.