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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 32
Min RPKM: 7.4
Std RPKM: 3.5
Median RPKM: 15.5
GTEX-WHSE-0011-R5A-SM-3P5ZO
32.0
GTEX-WWYW-0011-R5A-SM-3NB3E
25.6
GTEX-T2IS-0011-R5A-SM-32QP4
24.4
GTEX-13OVJ-0011-R5a-SM-5P9H7
23.4
GTEX-PVOW-0011-R5A-SM-32PL7
22.9
GTEX-QMR6-0011-R5A-SM-32PKT
21.7
GTEX-XMD1-0011-R5A-SM-4AT47
21.7
GTEX-P44H-0011-R5A-SM-2XCEX
21.5
GTEX-13X6I-0011-R5a-SM-5PNWW
20.7
GTEX-NPJ8-0011-R5a-SM-2HMJY
20.1
GTEX-12WSB-0011-R5b-SM-5GU67
19.8
GTEX-QVJO-0011-R5A-SM-2S1QM
19.8
GTEX-N7MT-0011-R5a-SM-2I3G6
19.7
GTEX-NL4W-0011-R5a-SM-2I3GD
19.5
GTEX-X585-0011-R5A-SM-46MVI
19.3
GTEX-13N1W-0011-R5b-SM-5MR5Q
19.0
GTEX-WVLH-0011-R5A-SM-3MJFW
18.8
GTEX-X4XX-0011-R5A-SM-46MWN
18.8
GTEX-13NYS-0011-R5a-SM-5MR4D
18.5
GTEX-132Q8-0011-R5a-SM-5IJDM
18.3
GTEX-ZAB4-0011-R5a-SM-4SOKC
18.3
GTEX-13SLW-0011-R5b-SM-5SI6Z
18.2
GTEX-11H98-0011-R5b-SM-57WCF
18.0
GTEX-13OW6-0011-R5a-SM-5O9BK
18.0
GTEX-13FHO-0011-R5b-SM-5LZZ3
17.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y
17.7
GTEX-PWO3-0011-R5A-SM-2I5EZ
17.7
GTEX-12WSA-0011-R5b-SM-5GU5I
17.3
GTEX-13JUV-0011-R5a-SM-5LZY5
17.2
GTEX-13JVG-0011-R5a-SM-5MR4O
17.1
GTEX-145LS-0011-R5a-SM-5SI65
17.0
GTEX-NPJ7-0011-R5a-SM-33HBK
17.0
GTEX-11GSP-0011-R5a-SM-57WBE
16.9
GTEX-WZTO-0011-R5B-SM-3NMC5
16.9
GTEX-144GO-0011-R5a-SM-5PNUR
16.7
GTEX-14BIM-0011-R5b-SM-5S2RM
16.7
GTEX-N7MS-0011-R5a-SM-2HMK8
16.7
GTEX-T6MN-0011-R5A-SM-32QPD
16.7
GTEX-13O3O-0011-R5b-SM-5KM44
16.6
GTEX-OHPN-0011-R5A-SM-2I5FF
16.5
GTEX-TSE9-0011-R5A-SM-3DB7J
16.5
GTEX-131YS-0011-R5b-SM-5K7YB
16.4
GTEX-13X6K-0011-R5b-SM-5PNUE
16.4
GTEX-RVPU-0011-R5A-SM-2XCAD
16.3
GTEX-1399T-0011-R5b-SM-5IJDK
16.1
GTEX-13FXS-0011-R5b-SM-5LZYE
16.1
GTEX-ZE9C-0011-R5a-SM-5EGLO
16.1
GTEX-13CIG-0011-R5b-SM-5L3F2
16.0
GTEX-139TT-0011-R5b-SM-5K7W8
15.9
GTEX-13FLV-0011-R5a-SM-5LZWT
15.9
GTEX-13PVQ-0011-R5b-SM-5O9DI
15.9
GTEX-13OW8-0011-R5b-SM-5L3FQ
15.8
GTEX-ZF28-0011-R5a-SM-4WWCZ
15.8
GTEX-12WSF-0011-R5a-SM-5HL8K
15.7
GTEX-13RTJ-0011-R5a-SM-5P9HR
15.6
GTEX-X261-0011-R5A-SM-3NMB4
15.6
GTEX-Y8DK-0011-R5B-SM-4RTW6
15.6
GTEX-NL3H-0011-R5a-SM-2I3GB
15.5
GTEX-RVPV-0011-R5A-SM-2TF69
15.5
GTEX-11WQC-0011-R5a-SM-5BC74
15.4
GTEX-13CZV-0011-R5a-SM-5K7XA
15.3
GTEX-13OW5-0011-R5b-SM-5L3FR
15.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
15.2
GTEX-139TS-0011-R5b-SM-5J2MZ
15.2
GTEX-13G51-0011-R5a-SM-5L3EB
15.2
GTEX-RU72-0011-R5A-SM-2TF6U
15.0
GTEX-S7SE-0011-R5A-SM-2XCDA
15.0
GTEX-YFC4-0011-R5a-SM-4RGLR
14.9
GTEX-ZUA1-0011-R5b-SM-51MTG
14.9
GTEX-R55E-0011-R5A-SM-2TC5N
14.8
GTEX-13OVL-0011-R5b-SM-5L3FU
14.7
GTEX-13O3Q-0011-R5b-SM-5P9H4
14.5
GTEX-1445S-0011-R5a-SM-5PNUS
14.5
GTEX-Q2AG-0011-R5A-SM-2HMJH
14.4
GTEX-UTHO-0011-R5A-SM-3GIJD
14.4
GTEX-13OVH-0011-R5b-SM-5KM4L
14.3
GTEX-ZE7O-0011-R5a-SM-57WBO
14.3
GTEX-12WSC-0011-R5b-SM-5CVNS
14.2
GTEX-12ZZY-0011-R5a-SM-5EGL9
14.1
GTEX-13S7M-0011-R5b-SM-5P9HS
14.1
GTEX-12WSD-0011-R5b-SM-5CVNG
13.8
GTEX-13SLX-0011-R5a-SM-5O9BV
13.8
GTEX-OXRN-0011-R5A-SM-2I5EF
13.7
GTEX-T5JC-0011-R5A-SM-32PLK
13.7
GTEX-ZXG5-0011-R5b-SM-57WBN
13.7
GTEX-11NV4-0011-R5a-SM-5NQ88
13.6
GTEX-139T8-0011-R5b-SM-5J1MO
13.6
GTEX-12ZZW-0011-R5a-SM-5DUVN
13.5
GTEX-13NYB-0011-R5a-SM-5MR45
13.5
GTEX-13OW7-0011-R5b-SM-5O9DM
13.5
GTEX-145MH-0011-R5a-SM-5P9JT
13.5
GTEX-14ABY-0011-R5b-SM-5SI7B
13.5
GTEX-WL46-0011-R5A-SM-3LK6V
13.4
GTEX-14BIN-0011-R5b-SM-5SI78
13.3
GTEX-13VXU-0011-R5a-SM-5O9D7
13.2
GTEX-13X6J-0011-R5b-SM-5PNWT
13.2
GTEX-13FLW-0011-R5a-SM-5LZX6
13.1
GTEX-ZV68-0011-R5a-SM-4YCDW
12.9
GTEX-ZVZQ-0011-R5b-SM-57WDC
12.8
GTEX-13PLJ-0011-R5a-SM-5O9BG
12.7
GTEX-Z93S-0011-R5b-SM-4RGNI
12.7
GTEX-1313W-0011-R5b-SM-5L3EP
12.6
GTEX-12ZZX-0011-R5a-SM-5HL89
12.4
GTEX-11OF3-0011-R5a-SM-57WB4
12.1
GTEX-XOTO-0011-R5A-SM-4B657
12.1
GTEX-12WSH-0011-R5b-SM-5P9F3
12.0
GTEX-S7PM-0011-R5A-SM-3NM8G
11.9
GTEX-ZVT3-0011-R5a-SM-51MSI
11.8
GTEX-144GL-0011-R5b-SM-5PNUJ
11.2
GTEX-13112-0011-R5b-SM-5DUV8
10.6
GTEX-13FHP-0011-R5b-SM-5LZY2
10.1
GTEX-11UD1-0011-R5b-SM-5P9FP
10.0
GTEX-YJ89-0011-R5a-SM-4V6GM
9.9
GTEX-1477Z-0011-R5b-SM-5PNUO
9.3
GTEX-13CF2-0011-R5a-SM-5LZWS
9.2
GTEX-13NZA-0011-R5b-SM-5KM4K
7.4
GTEX-145MG-0011-R5b-SM-5S2VU
7.4
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.