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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 74.3
Min RPKM: 11.7
Std RPKM: 15.4
Median RPKM: 39
GTEX-Q734-0726-SM-48TZP
74.3
GTEX-11GSP-0226-SM-5A5KV
73.4
GTEX-11ZTS-1926-SM-5CVLA
73.0
GTEX-P78B-1926-SM-3P616
70.1
GTEX-11EM3-1726-SM-5N9D1
68.1
GTEX-POMQ-1426-SM-3P61D
67.1
GTEX-TML8-0926-SM-4DXSJ
66.6
GTEX-133LE-1226-SM-5IFGC
66.4
GTEX-11P81-1526-SM-5P9GS
62.1
GTEX-W5WG-0926-SM-4RTX9
61.5
GTEX-13FTX-0926-SM-5IFF7
57.4
GTEX-Y3IK-2026-SM-4YCDG
57.1
GTEX-13N11-0526-SM-5IJFI
56.5
GTEX-ZPIC-1426-SM-4WWCP
55.4
GTEX-11VI4-1026-SM-5EQM1
55.2
GTEX-PWCY-1326-SM-48TCU
54.1
GTEX-P4PP-2426-SM-3P61L
54.1
GTEX-ZLWG-0926-SM-4WWC3
53.6
GTEX-ZZPU-2126-SM-5EGIU
53.5
GTEX-T2IS-2026-SM-4DM6W
52.8
GTEX-Y114-1726-SM-4TT7U
52.1
GTEX-13W3W-1526-SM-5LU5I
51.2
GTEX-11I78-1926-SM-59878
49.2
GTEX-XV7Q-1426-SM-4BRWA
48.9
GTEX-YJ8O-1026-SM-5CVM5
48.4
GTEX-13U4I-2126-SM-5LU55
48.1
GTEX-ZVT3-2626-SM-5GU5L
47.3
GTEX-ZYWO-1926-SM-5E456
47.2
GTEX-PX3G-2426-SM-48TZZ
46.9
GTEX-QCQG-1426-SM-48U22
46.2
GTEX-PWN1-2426-SM-48TDD
45.8
GTEX-12WSJ-1226-SM-5LU91
45.8
GTEX-U3ZN-1026-SM-4DXTC
45.5
GTEX-OHPK-2426-SM-3MJGH
44.8
GTEX-13OVI-0726-SM-5L3DD
44.1
GTEX-13X6H-1026-SM-5SIBE
43.7
GTEX-RU72-2226-SM-46MUE
42.6
GTEX-11ZVC-1426-SM-5EGGA
42.4
GTEX-11XUK-1626-SM-5GU5O
42.2
GTEX-S341-0726-SM-4AD5R
42.1
GTEX-S32W-1226-SM-4AD67
41.5
GTEX-YFC4-2726-SM-5IFJW
41.4
GTEX-ZVT2-0326-SM-5E44G
41.3
GTEX-UJHI-1226-SM-4IHLR
41.2
GTEX-132AR-1426-SM-5IFF1
41.2
GTEX-1313W-2726-SM-5P9IX
40.5
GTEX-XYKS-1726-SM-4E3IO
39.8
GTEX-ZP4G-0626-SM-4WWF1
39.7
GTEX-12WSD-2726-SM-59HLR
39.0
GTEX-139D8-2426-SM-5KM3A
38.9
GTEX-RU1J-0826-SM-46MUU
38.8
GTEX-11DXX-1426-SM-5GIDU
37.6
GTEX-ZYFG-1726-SM-5GZZB
37.3
GTEX-13PL7-2326-SM-5L3FY
36.5
GTEX-146FH-2526-SM-5Q5BP
35.8
GTEX-RWS6-1026-SM-47JXD
35.6
GTEX-X15G-1726-SM-4PQZN
35.5
GTEX-XUJ4-1326-SM-4BOQ9
34.9
GTEX-1269C-1826-SM-5N9E1
34.8
GTEX-13OVJ-2426-SM-5KM3I
33.6
GTEX-S4P3-0926-SM-4AD54
33.0
GTEX-XUW1-0126-SM-4BOOQ
32.2
GTEX-T5JW-0426-SM-4DM7M
31.7
GTEX-QVJO-3126-SM-4R1KC
30.6
GTEX-XMD3-2326-SM-4AT5H
30.6
GTEX-11EMC-1726-SM-5H11P
30.5
GTEX-11ZTT-1826-SM-5CVLN
30.3
GTEX-14AS3-1326-SM-5RQJE
29.5
GTEX-145ME-1226-SM-5SIB6
28.6
GTEX-ZYY3-2726-SM-5EGH4
28.3
GTEX-12ZZX-2026-SM-5LZV9
27.2
GTEX-13O3O-2726-SM-5KM35
27.1
GTEX-S7SF-1326-SM-4AD4P
26.8
GTEX-TMMY-1726-SM-4DXTD
26.6
GTEX-ZAJG-2726-SM-5S2MU
26.6
GTEX-13QIC-1526-SM-5IJFL
26.1
GTEX-13VXT-1526-SM-5LU3J
26.1
GTEX-TSE9-2226-SM-4DXUR
26.0
GTEX-12WSK-1926-SM-5LZVK
24.8
GTEX-P4QT-2426-SM-3NMCL
24.0
GTEX-13QBU-1526-SM-5LU3W
23.7
GTEX-ZC5H-2026-SM-5CVN2
23.6
GTEX-RTLS-2326-SM-46MUH
22.5
GTEX-131YS-2226-SM-5P9G8
22.0
GTEX-XUZC-1026-SM-4BOPY
21.7
GTEX-1399S-2126-SM-5J2MH
18.2
GTEX-12WSG-1426-SM-5FQUK
17.9
GTEX-13D11-1126-SM-5KLYS
16.5
GTEX-WWYW-2726-SM-4MVOP
16.3
GTEX-WI4N-2526-SM-4OOSE
15.9
GTEX-X8HC-2726-SM-46MUA
15.8
GTEX-12WSB-2226-SM-5GCOS
15.4
GTEX-13PVR-1226-SM-5RQJ2
14.5
GTEX-T6MO-1126-SM-4DM5D
14.4
GTEX-X4EO-2426-SM-4QASD
13.9
GTEX-OHPL-2426-SM-48TDN
13.3
GTEX-PLZ4-2826-SM-3P617
11.7
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OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.