Tissue expression of C5orf56 - Summary - The Human Protein Atlas

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C5orf56

TISSUE

CELL

CANCER

TISSUE ATLAS

GENE/PROTEIN

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	C5orf56
Gene description	Chromosome 5 open reading frame 56
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	5
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Mixed
GTEx:	Expressed in all
FANTOM5:	Expressed in all

Protein evidence

Evidence at transcript level

DATA RELIABILITY
Reliability score	Pending normal tissue annotation.

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

N/A

Cerebral cortex

N/A

Hippocampus

N/A

N/A

Caudate

N/A

N/A

Cerebellum

N/A

N/A

Endocrine tissues

N/A

Thyroid gland

N/A

Parathyroid gland

N/A

Adrenal gland

N/A

Bone marrow & immune system

N/A

Appendix

N/A

Bone marrow

N/A

Lymph node

N/A

Tonsil

N/A

Spleen

N/A

Muscle tissues

N/A

Heart muscle

N/A

Skeletal muscle

N/A

Smooth muscle

N/A

Lung

N/A

Nasopharynx

N/A

N/A

Bronchus

N/A

N/A

Lung

N/A

Liver & gallbladder

N/A

Liver

N/A

Gallbladder

N/A

Pancreas

N/A

Pancreas

N/A

Gastrointestinal tract

N/A

Oral mucosa

N/A

N/A

Salivary gland

N/A

Esophagus

N/A

Stomach

N/A

Duodenum

N/A

Small intestine

N/A

Colon

N/A

Rectum

N/A

Kidney & urinary bladder

N/A

Kidney

N/A

Urinary bladder

N/A

Male tissues

N/A

Testis

N/A

Epididymis

N/A

Prostate

N/A

Seminal vesicle

N/A

Female tissues

N/A

Breast

N/A

Vagina

N/A

N/A

Cervix, uterine

N/A

Endometrium

N/A

Fallopian tube

N/A

Ovary

N/A

Placenta

N/A

Adipose & soft tissue

N/A

Adipose tissue

N/A

Soft tissue

N/A

N/A

Skin

N/A

Skin

N/A

PROTEIN EXPRESSION OVERVIEW
Pending normal tissue annotation.

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Mixed
GTEx dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	C5orf56
Synonyms
Description	Chromosome 5 open reading frame 56 (HGNC Symbol)
Entrez gene summary
Chromosome	5
Cytoband	q31.1
Chromosome location (bp)	132410636 - 132476044
Protein evidence	Evidence at transcript level (all genes)
Ensembl	ENSG00000197536 (version 83.38)
Entrez gene
UniProt	Q8N8D9 (UniProt - Evidence at transcript level)
neXtProt	NX_Q8N8D9
Antibodypedia	C5orf56 antibodies

PROTEIN BROWSER

C5orf56-001	C5orf56-002	C5orf56-003	C5orf56-005	C5orf56-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
C5orf56-001 ENSP00000338228 ENST00000337752	Q8N8D9 [Direct mapping] Uncharacterized protein C5orf56 Show all	THUMBUP predicted membrane proteins SPOCTOPUS predicted secreted proteins Predicted intracellular proteins Show all		126 aa 14.7 kDa	No	0
C5orf56-002 ENSP00000368236 ENST00000378953	Q8N8D9 [Direct mapping] Uncharacterized protein C5orf56 Show all	Predicted intracellular proteins Show all		117 aa 12.8 kDa	No	0
C5orf56-003 ENSP00000368230 ENST00000378947	A6NHD6 [Direct mapping] Uncharacterized protein C5orf56 Show all	Predicted intracellular proteins Show all		80 aa 9.2 kDa	No	0
C5orf56-005 ENSP00000385513 ENST00000407797	B5MCK2 [Direct mapping] Uncharacterized protein C5orf56 Show all	Predicted intracellular proteins Show all		37 aa 4.1 kDa	No	0
C5orf56-201 ENSP00000481774 ENST00000621237	Q8N8D9 [Direct mapping] Uncharacterized protein C5orf56 Show all	THUMBUP predicted membrane proteins SPOCTOPUS predicted secreted proteins Predicted intracellular proteins Show all		126 aa 14.7 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.