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Gene name

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Method

Validation

Method

Validation

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Expression

Tissue

Specificity

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Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA043257

 

Antibody HPA053558

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
 

Product name

HPA043257   HPA053558  

Host species

Rabbit   Rabbit  

Clonality

pAb   pAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand  

Other gene match

   

Released in version

8   12  

References

   

VALIDATION SUMMARY

 
 

Antibody HPA043257

 

Antibody HPA053558

 
Immunocytochemistry

  Approved  
Immunohistochemistry


Validated
 

Validated
 
Western blot

Supported   Uncertain  
Protein array

Supported   Supported  

IMMUNOCYTOCHEMISTRY

 
 

Antibody HPA043257

 

Antibody HPA053558

 

Standard validation

  Approved  

   

Figure description

  Immunofluorescent staining of human cell line A549 shows localization to vesicles.  

Antibody dilution

  1:78  

Literature conformity

  The subcellular location is partly supported by literature or no literature is available.  

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA043257

 

Antibody HPA053558

 

Formal validation: Independent

Validated

Spearman correlation >0.6 for protein expression in tissues using independent antibodies.
 
Validated

Spearman correlation >0.6 for protein expression in tissues using independent antibodies.
 

 

 
 

 

Figure description

Distribution of protein expression (antibody staining).
Spearman correlation with HPA053558 across 76 cell types.
  Distribution of protein expression (antibody staining).
Spearman correlation with HPA043257 across 76 cell types.
 
 

Standard validation

Supported   Supported  

   

Figure description

Immunohistochemical staining of human fallopian tube shows strong cytopalsmic positivity in glandular cells.   Immunohistochemical staining of human fallopian tube shows strong cytoplasmic positivity in glandular cells.  

Expression

RNA: detected in 35 tissues
Protein: detected in 68 cell types
  RNA: detected in 35 tissues
Protein: detected in 28 cell types
 

Retrieval

HIER pH6   HIER pH6  

Antibody dilution

1:700   1:850  

Literature conformity

No avaliable gene/protein characterization data.   No avaliable gene/protein characterization data.  

RNA consistency

Mainly consistent with RNA expression data.   Mainly consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA043257

 

Antibody HPA053558

 

Standard validation

Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
  Uncertain

Analysis performed using a standard panel of samples.
Single band differing more than +/-20% from predicted size in kDa and not supported by experimental and/or bioinformatic data.
 

   

Figure description

Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
  Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
 

Target mass (kDa)

35.9, 26.2   35.9  

Antibody dilution

1:250   1:390  

PROTEIN ARRAY

 
 

Antibody HPA043257

 

Antibody HPA053558

 

Standard validation

Supported

Pass with single peak corresponding to interaction only with its own antigen.
  Supported

Pass with single peak corresponding to interaction only with its own antigen.
 

   

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.  

Antibody dilution

1:3000   1:3150  

ANTIGEN INFORMATION

 
 

Antibody HPA043257

 

Antibody HPA053558

 

Antigen

Recombinant protein fragment   Recombinant protein fragment  

Length (aa)

77   86  

Antigen sequence

RVLVFDIPAKGPNIVLSEELAGHQMPITDIATEPAQGQDCVADMVTADDS
GLLCVWRSGPEFTLLTRIPGFGVPCPS
 
TTGNLHVQINAHARAICALDLASEVGKLLSAGEDTFVHIWKLSRNPESGY
IEVEHCHGECVADTQLCGARFCDSSGNSFAVTGYDL
 

Matching transcripts

WDR54-001 - ENSP00000006526 [100%]
WDR54-005 - ENSP00000387236 [100%]
  WDR54-001 - ENSP00000006526 [100%]
 

Other gene match

   
ANTIGEN VIEW
WDR54-001
WDR54-005
 

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The Human Protein Atlas project is funded
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