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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:37.7RPKM
FANTOM5:145.4Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Low
 

Antibody staining

Antibody CAB017631

 

Glial cells

Not detected  

Neuronal cells

Low  
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

37.7

GTEx sample id

RPKM

32.238.644.215.057.10510152025303540455055
 
32.238.644.215.057.10510152025303540455055

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 37.7
Samples: 117

Max RPKM: 57.1
Min RPKM: 15
Std RPKM: 9.2
Median RPKM: 38.6
GTEX-QVJO-0011-R5A-SM-2S1QM 57.1
GTEX-P44H-0011-R5A-SM-2XCEX 56.6
GTEX-131YS-0011-R5b-SM-5K7YB 55.7
GTEX-T2IS-0011-R5A-SM-32QP4 55.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 55.4
GTEX-11H98-0011-R5b-SM-57WCF 54.1
GTEX-T6MN-0011-R5A-SM-32QPD 51.9
GTEX-13G51-0011-R5a-SM-5L3EB 51.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 51.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 50.8
GTEX-N7MT-0011-R5a-SM-2I3G6 48.8
GTEX-R55E-0011-R5A-SM-2TC5N 48.8
GTEX-13X6K-0011-R5b-SM-5PNUE 48.7
GTEX-S7SE-0011-R5A-SM-2XCDA 48.4
GTEX-WHSE-0011-R5A-SM-3P5ZO 48.0
GTEX-T5JC-0011-R5A-SM-32PLK 47.5
GTEX-132Q8-0011-R5a-SM-5IJDM 46.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 46.4
GTEX-14BIM-0011-R5b-SM-5S2RM 46.2
GTEX-N7MS-0011-R5a-SM-2HMK8 46.2
GTEX-WVLH-0011-R5A-SM-3MJFW 45.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 45.6
GTEX-UTHO-0011-R5A-SM-3GIJD 45.4
GTEX-13OW6-0011-R5a-SM-5O9BK 44.8
GTEX-12WSB-0011-R5b-SM-5GU67 44.5
GTEX-145MH-0011-R5a-SM-5P9JT 44.5
GTEX-XMD1-0011-R5A-SM-4AT47 44.5
GTEX-13X6J-0011-R5b-SM-5PNWT 44.3
GTEX-PVOW-0011-R5A-SM-32PL7 44.3
GTEX-12WSC-0011-R5b-SM-5CVNS 44.2
GTEX-1313W-0011-R5b-SM-5L3EP 44.2
GTEX-13X6I-0011-R5a-SM-5PNWW 44.2
GTEX-13JUV-0011-R5a-SM-5LZY5 43.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 43.8
GTEX-13NYS-0011-R5a-SM-5MR4D 43.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 43.5
GTEX-WZTO-0011-R5B-SM-3NMC5 43.5
GTEX-145LS-0011-R5a-SM-5SI65 43.4
GTEX-OHPN-0011-R5A-SM-2I5FF 42.8
GTEX-WWYW-0011-R5A-SM-3NB3E 42.2
GTEX-11GSP-0011-R5a-SM-57WBE 42.1
GTEX-ZUA1-0011-R5b-SM-51MTG 42.1
GTEX-139TT-0011-R5b-SM-5K7W8 41.5
GTEX-11OF3-0011-R5a-SM-57WB4 41.0
GTEX-13OVL-0011-R5b-SM-5L3FU 41.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 40.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 39.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 39.9
GTEX-13SLX-0011-R5a-SM-5O9BV 39.8
GTEX-14ABY-0011-R5b-SM-5SI7B 39.8
GTEX-RU72-0011-R5A-SM-2TF6U 39.6
GTEX-1399T-0011-R5b-SM-5IJDK 39.5
GTEX-NL4W-0011-R5a-SM-2I3GD 39.2
GTEX-13CZV-0011-R5a-SM-5K7XA 39.1
GTEX-X585-0011-R5A-SM-46MVI 39.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 39.1
GTEX-13FXS-0011-R5b-SM-5LZYE 38.9
GTEX-WL46-0011-R5A-SM-3LK6V 38.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 38.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 38.0
GTEX-12WSF-0011-R5a-SM-5HL8K 37.8
GTEX-13JVG-0011-R5a-SM-5MR4O 37.8
GTEX-13O3O-0011-R5b-SM-5KM44 37.4
GTEX-13VXU-0011-R5a-SM-5O9D7 37.4
GTEX-ZE7O-0011-R5a-SM-57WBO 37.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 37.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 36.8
GTEX-QMR6-0011-R5A-SM-32PKT 36.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 36.5
GTEX-144GO-0011-R5a-SM-5PNUR 36.5
GTEX-RVPU-0011-R5A-SM-2XCAD 35.9
GTEX-RVPV-0011-R5A-SM-2TF69 35.7
GTEX-11NV4-0011-R5a-SM-5NQ88 35.5
GTEX-13S7M-0011-R5b-SM-5P9HS 35.3
GTEX-13FLW-0011-R5a-SM-5LZX6 34.6
GTEX-12WSA-0011-R5b-SM-5GU5I 34.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 34.2
GTEX-13NYB-0011-R5a-SM-5MR45 34.0
GTEX-NPJ7-0011-R5a-SM-33HBK 34.0
GTEX-13FLV-0011-R5a-SM-5LZWT 33.9
GTEX-12WSD-0011-R5b-SM-5CVNG 33.7
GTEX-13OW7-0011-R5b-SM-5O9DM 33.7
GTEX-12ZZX-0011-R5a-SM-5HL89 33.6
GTEX-X4XX-0011-R5A-SM-46MWN 33.5
GTEX-13OW5-0011-R5b-SM-5L3FR 33.3
GTEX-1445S-0011-R5a-SM-5PNUS 33.0
GTEX-Z93S-0011-R5b-SM-4RGNI 32.6
GTEX-TSE9-0011-R5A-SM-3DB7J 32.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 32.1
GTEX-YFC4-0011-R5a-SM-4RGLR 31.9
GTEX-NL3H-0011-R5a-SM-2I3GB 31.8
GTEX-13OVH-0011-R5b-SM-5KM4L 31.5
GTEX-ZXG5-0011-R5b-SM-57WBN 31.0
GTEX-OXRN-0011-R5A-SM-2I5EF 30.0
GTEX-14BIN-0011-R5b-SM-5SI78 28.9
GTEX-XOTO-0011-R5A-SM-4B657 28.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 28.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 28.2
GTEX-11WQC-0011-R5a-SM-5BC74 27.2
GTEX-X261-0011-R5A-SM-3NMB4 26.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 26.0
GTEX-ZVT3-0011-R5a-SM-51MSI 25.9
GTEX-144GL-0011-R5b-SM-5PNUJ 25.4
GTEX-13112-0011-R5b-SM-5DUV8 25.1
GTEX-139T8-0011-R5b-SM-5J1MO 24.5
GTEX-139TS-0011-R5b-SM-5J2MZ 24.5
GTEX-ZV68-0011-R5a-SM-4YCDW 23.1
GTEX-13CIG-0011-R5b-SM-5L3F2 22.7
GTEX-S7PM-0011-R5A-SM-3NM8G 22.4
GTEX-11UD1-0011-R5b-SM-5P9FP 22.2
GTEX-YJ89-0011-R5a-SM-4V6GM 22.2
GTEX-13CF2-0011-R5a-SM-5LZWS 21.6
GTEX-12WSH-0011-R5b-SM-5P9F3 20.5
GTEX-13FHP-0011-R5b-SM-5LZY2 20.4
GTEX-1477Z-0011-R5b-SM-5PNUO 20.2
GTEX-13NZA-0011-R5b-SM-5KM4K 16.7
GTEX-145MG-0011-R5b-SM-5S2VU 15.0
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

145.4

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 145.4
FF:10164-103B2 76 years, female 163.9
FF:10379-105H1 89 years, female 126.8

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