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TAC1
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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:138.5RPKM
FANTOM5:268.6Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Low
 

Antibody staining

Antibody HPA014429

 

Antibody CAB004588

 

Glial cells

Not detected   Not detected  

Neuronal cells

Medium   Low  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

138.5

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 138.5
Samples: 117

Max RPKM: 807.3
Min RPKM: 4.9
Std RPKM: 108.2
Median RPKM: 121.8
GTEX-T2IS-0011-R5A-SM-32QP4 807.3
GTEX-12WSC-0011-R5b-SM-5CVNS 365.8
GTEX-13X6J-0011-R5b-SM-5PNWT 333.1
GTEX-145MH-0011-R5a-SM-5P9JT 311.0
GTEX-1313W-0011-R5b-SM-5L3EP 305.7
GTEX-WZTO-0011-R5B-SM-3NMC5 295.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 285.6
GTEX-WL46-0011-R5A-SM-3LK6V 283.2
GTEX-13G51-0011-R5a-SM-5L3EB 280.4
GTEX-1399T-0011-R5b-SM-5IJDK 271.1
GTEX-Z93S-0011-R5b-SM-4RGNI 270.6
GTEX-S7SE-0011-R5A-SM-2XCDA 264.1
GTEX-TSE9-0011-R5A-SM-3DB7J 262.5
GTEX-ZUA1-0011-R5b-SM-51MTG 259.5
GTEX-T6MN-0011-R5A-SM-32QPD 254.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 253.5
GTEX-PVOW-0011-R5A-SM-32PL7 246.6
GTEX-131YS-0011-R5b-SM-5K7YB 237.5
GTEX-12WSF-0011-R5a-SM-5HL8K 232.4
GTEX-14ABY-0011-R5b-SM-5SI7B 227.9
GTEX-WHSE-0011-R5A-SM-3P5ZO 227.3
GTEX-13FXS-0011-R5b-SM-5LZYE 225.0
GTEX-13VXU-0011-R5a-SM-5O9D7 223.6
GTEX-11OF3-0011-R5a-SM-57WB4 222.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 222.4
GTEX-WVLH-0011-R5A-SM-3MJFW 221.4
GTEX-13O3O-0011-R5b-SM-5KM44 213.0
GTEX-13OVL-0011-R5b-SM-5L3FU 211.5
GTEX-WWYW-0011-R5A-SM-3NB3E 202.2
GTEX-13SLX-0011-R5a-SM-5O9BV 201.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 198.8
GTEX-13NYB-0011-R5a-SM-5MR45 193.1
GTEX-145LS-0011-R5a-SM-5SI65 192.2
GTEX-QVJO-0011-R5A-SM-2S1QM 190.5
GTEX-13OW7-0011-R5b-SM-5O9DM 186.5
GTEX-13FLV-0011-R5a-SM-5LZWT 185.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 182.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 179.6
GTEX-T5JC-0011-R5A-SM-32PLK 179.1
GTEX-X585-0011-R5A-SM-46MVI 178.0
GTEX-11NV4-0011-R5a-SM-5NQ88 175.4
GTEX-13OW6-0011-R5a-SM-5O9BK 173.8
GTEX-13FLW-0011-R5a-SM-5LZX6 171.1
GTEX-11GSP-0011-R5a-SM-57WBE 165.6
GTEX-139TT-0011-R5b-SM-5K7W8 165.5
GTEX-UTHO-0011-R5A-SM-3GIJD 157.6
GTEX-11H98-0011-R5b-SM-57WCF 155.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 152.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 146.3
GTEX-14BIM-0011-R5b-SM-5S2RM 145.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 141.8
GTEX-P44H-0011-R5A-SM-2XCEX 139.4
GTEX-13S7M-0011-R5b-SM-5P9HS 137.6
GTEX-N7MS-0011-R5a-SM-2HMK8 136.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 132.4
GTEX-12WSD-0011-R5b-SM-5CVNG 129.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 129.0
GTEX-12ZZX-0011-R5a-SM-5HL89 123.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 121.8
GTEX-XOTO-0011-R5A-SM-4B657 120.4
GTEX-RU72-0011-R5A-SM-2TF6U 109.3
GTEX-13OW5-0011-R5b-SM-5L3FR 107.8
GTEX-13X6K-0011-R5b-SM-5PNUE 107.1
GTEX-N7MT-0011-R5a-SM-2I3G6 105.4
GTEX-13CZV-0011-R5a-SM-5K7XA 105.2
GTEX-13X6I-0011-R5a-SM-5PNWW 104.4
GTEX-13NYS-0011-R5a-SM-5MR4D 103.5
GTEX-14BIN-0011-R5b-SM-5SI78 102.6
GTEX-13JUV-0011-R5a-SM-5LZY5 98.6
GTEX-R55E-0011-R5A-SM-2TC5N 92.5
GTEX-NL3H-0011-R5a-SM-2I3GB 92.2
GTEX-ZE7O-0011-R5a-SM-57WBO 90.8
GTEX-13CIG-0011-R5b-SM-5L3F2 87.1
GTEX-12WSB-0011-R5b-SM-5GU67 87.0
GTEX-ZXG5-0011-R5b-SM-57WBN 85.5
GTEX-132Q8-0011-R5a-SM-5IJDM 85.0
GTEX-YFC4-0011-R5a-SM-4RGLR 83.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 82.0
GTEX-RVPU-0011-R5A-SM-2XCAD 81.7
GTEX-NL4W-0011-R5a-SM-2I3GD 79.5
GTEX-13OVH-0011-R5b-SM-5KM4L 73.3
GTEX-RVPV-0011-R5A-SM-2TF69 64.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 61.0
GTEX-QMR6-0011-R5A-SM-32PKT 60.9
GTEX-144GO-0011-R5a-SM-5PNUR 59.0
GTEX-13JVG-0011-R5a-SM-5MR4O 58.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 55.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 55.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 53.5
GTEX-11WQC-0011-R5a-SM-5BC74 52.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 52.4
GTEX-ZVT3-0011-R5a-SM-51MSI 47.2
GTEX-OXRN-0011-R5A-SM-2I5EF 47.0
GTEX-XMD1-0011-R5A-SM-4AT47 46.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 46.3
GTEX-12WSA-0011-R5b-SM-5GU5I 41.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 40.5
GTEX-YJ89-0011-R5a-SM-4V6GM 37.4
GTEX-OHPN-0011-R5A-SM-2I5FF 34.5
GTEX-X4XX-0011-R5A-SM-46MWN 30.9
GTEX-13112-0011-R5b-SM-5DUV8 30.8
GTEX-ZV68-0011-R5a-SM-4YCDW 30.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 27.7
GTEX-X261-0011-R5A-SM-3NMB4 27.2
GTEX-144GL-0011-R5b-SM-5PNUJ 26.8
GTEX-13FHP-0011-R5b-SM-5LZY2 25.6
GTEX-139TS-0011-R5b-SM-5J2MZ 18.7
GTEX-1477Z-0011-R5b-SM-5PNUO 13.6
GTEX-1445S-0011-R5a-SM-5PNUS 13.2
GTEX-12WSH-0011-R5b-SM-5P9F3 12.9
GTEX-S7PM-0011-R5A-SM-3NM8G 12.8
GTEX-NPJ7-0011-R5a-SM-33HBK 12.6
GTEX-13CF2-0011-R5a-SM-5LZWS 9.3
GTEX-13NZA-0011-R5b-SM-5KM4K 6.9
GTEX-145MG-0011-R5b-SM-5S2VU 6.8
GTEX-11UD1-0011-R5b-SM-5P9FP 6.0
GTEX-139T8-0011-R5b-SM-5J1MO 4.9
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

268.6

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 268.6
FF:10379-105H1 89 years, female 452.3
FF:10164-103B2 76 years, female 84.8

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