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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:78.0TPM
GTEx:10.1RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Medium
Endothelial cells:Not detected
Neuropil:Not detected
Processes/nerve bundles:High
 

Extended tissue profile- Antibody HPA014429

Glial cells

Not detected

Neuronal cells

Not detected

Processes/nerve bundles

High

Extended tissue profile- Antibody CAB004588

Glial cells

Not detected

Neuronal cells

Not detected

Processes/nerve bundles

Not available

Antibody staining

Antibody HPA014429

 

Antibody CAB004588

 

Glial cells

Not detected   Not detected  

Neuronal cells

Not detected   Not detected  

Endothelial cells

Low   Not detected  

Neuropil

Not detected   Not detected  
      
      
      
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

78.0

N/A Male, age 5
Sample 1
TPM: 138.2
overview Female, age 40
Sample 2
TPM: 8.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 87.5
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

10.1

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 7.0
Samples: 114

Max RPKM: 20.1
Min RPKM: 0.4
Std RPKM: 4.2
Median RPKM: 6.4
GTEX-T2IS-3026-SM-32QPM 20.1
GTEX-11OC5-0726-SM-5P9JK 18.0
GTEX-PVOW-2526-SM-2XCF7 17.8
GTEX-WHSE-3026-SM-3P5ZH 17.1
GTEX-ZUA1-3026-SM-59HJC 15.4
GTEX-13X6J-3026-SM-5Q5CU 15.2
GTEX-13JUV-2926-SM-5LZX7 14.6
GTEX-WZTO-2926-SM-3NM9I 13.8
GTEX-13VXU-2926-SM-5LU5C 13.2
GTEX-11DXY-3226-SM-5GIDE 13.0
GTEX-RNOR-2326-SM-2TF4I 13.0
GTEX-Y8DK-0826-SM-4TT3T 12.7
GTEX-WVLH-3026-SM-3MJG9 11.9
GTEX-145MH-3026-SM-5Q5DZ 11.8
GTEX-WL46-2926-SM-3LK82 11.7
GTEX-13FLW-1426-SM-5K7YE 11.6
GTEX-12ZZZ-3026-SM-5BC67 11.3
GTEX-13O3Q-2926-SM-5KM45 11.3
GTEX-13SLX-3126-SM-5S2Q5 11.3
GTEX-12126-1026-SM-5P9JJ 11.2
GTEX-ZAK1-3026-SM-5S2MJ 11.2
GTEX-Y111-2726-SM-4TT3N 11.0
GTEX-131YS-3126-SM-5KLYT 10.9
GTEX-111FC-3126-SM-5GZZ2 10.7
GTEX-14ASI-3026-SM-5S2PN 10.7
GTEX-T5JC-2426-SM-3NMDB 10.6
GTEX-XOTO-3026-SM-4B65M 10.5
GTEX-13O3O-3126-SM-5KM3H 10.2
GTEX-YFC4-3126-SM-5PNV6 10.2
GTEX-144GL-3026-SM-5Q5CW 9.8
GTEX-117XS-3026-SM-5N9CA 9.7
GTEX-Q2AG-2926-SM-2HMJ3 9.7
GTEX-11ZUS-2926-SM-5FQSL 9.6
GTEX-TSE9-3026-SM-3DB76 9.5
GTEX-13OVH-3026-SM-5MR4N 9.4
GTEX-14BMV-3026-SM-5S2PQ 9.2
GTEX-T6MN-2626-SM-32PMQ 8.9
GTEX-13OW6-3026-SM-5J2MI 8.8
GTEX-1313W-3126-SM-5LZUI 8.7
GTEX-12WSC-3026-SM-5GCNF 8.4
GTEX-1399T-3026-SM-5KLZC 8.3
GTEX-13OW7-3026-SM-5L3GY 8.2
GTEX-145MG-3026-SM-5RQJA 8.1
GTEX-ZE7O-3126-SM-5HL5X 8.1
GTEX-147GR-3026-SM-5S2ML 8.0
GTEX-12ZZX-2926-SM-5GCOQ 7.7
GTEX-QMR6-1426-SM-32PLA 7.7
GTEX-ZYFD-3026-SM-5E44C 7.5
GTEX-13FHO-3026-SM-5J1O9 7.4
GTEX-13FHP-3026-SM-5IJBS 7.4
GTEX-11NUK-2926-SM-5A5MD 7.3
GTEX-11GSO-2926-SM-5HL73 7.2
GTEX-12WSH-3026-SM-5CVNI 7.2
GTEX-12ZZY-3026-SM-5GCOU 7.1
GTEX-11PRG-2926-SM-5987A 6.7
GTEX-YJ89-3026-SM-5IFJI 6.5
GTEX-13NYB-3026-SM-5IJD7 6.4
GTEX-145LS-3126-SM-5Q5BY 6.3
GTEX-13FXS-3126-SM-5J2NN 6.1
GTEX-11GS4-3126-SM-5A5LH 6.0
GTEX-11WQK-3026-SM-5EQL6 6.0
GTEX-13OW8-2826-SM-5L3GC 6.0
GTEX-145MF-2726-SM-5O995 6.0
GTEX-R55F-1326-SM-5S2V4 5.5
GTEX-WWYW-3126-SM-3NB39 5.5
GTEX-UTHO-3026-SM-3GAFB 5.3
GTEX-11DXW-1126-SM-5H12Q 5.2
GTEX-11ONC-2926-SM-5P9JM 5.0
GTEX-13NYC-2826-SM-5K7WR 4.9
GTEX-13PVQ-3026-SM-5SI93 4.8
GTEX-X585-3026-SM-46MWF 4.8
GTEX-14A5I-2926-SM-5Q5CQ 4.6
GTEX-11EMC-3226-SM-5EGKW 4.5
GTEX-13X6K-2926-SM-5Q5D5 4.4
GTEX-XLM4-3026-SM-4AT6L 4.4
GTEX-Z93S-2926-SM-57WB9 4.4
GTEX-13S7M-3126-SM-5RQJQ 4.3
GTEX-OXRN-2426-SM-2I5EQ 4.3
GTEX-1128S-2726-SM-5H12C 4.2
GTEX-12WSD-3126-SM-5HL7P 4.1
GTEX-131XW-3126-SM-5LZUC 4.1
GTEX-X4XX-3026-SM-3NMB2 3.9
GTEX-QVJO-1426-SM-2S1QY 3.8
GTEX-11EI6-3026-SM-5GZZO 3.7
GTEX-11O72-2926-SM-5BC4V 3.4
GTEX-13JVG-3126-SM-5L3FH 3.4
GTEX-12ZZW-2926-SM-5LZUP 3.3
GTEX-144FL-3026-SM-5O99C 3.3
GTEX-ZAJG-3126-SM-5HL9J 3.3
GTEX-QVUS-2826-SM-3GADB 3.1
GTEX-ZVT3-3026-SM-5E43N 3.0
GTEX-11NV4-2126-SM-5N9DS 2.9
GTEX-13G51-3026-SM-5IJB8 2.9
GTEX-13NYS-3126-SM-5KLYV 2.9
GTEX-139T8-1026-SM-5J2MC 2.8
GTEX-13QIC-2926-SM-5J2NF 2.8
GTEX-13OVJ-2826-SM-5L3GW 2.7
GTEX-13PL6-3126-SM-5LUAR 2.7
GTEX-NPJ7-2726-SM-2I3FT 2.5
GTEX-1192X-3126-SM-5N9BY 2.4
GTEX-N7MT-1126-SM-5SI7V 2.4
GTEX-RU72-3026-SM-5SI7Y 2.2
GTEX-132Q8-3026-SM-5PNVG 2.1
GTEX-QDT8-2926-SM-32PKC 2.1
GTEX-NPJ8-1526-SM-2D7VU 1.7
GTEX-1117F-3226-SM-5N9CT 1.6
GTEX-11GSP-3226-SM-5986O 1.4
GTEX-11TTK-2926-SM-5PNYP 1.4
GTEX-PWO3-0926-SM-2I5EY 1.4
GTEX-13IVO-2926-SM-5L3CZ 0.7
GTEX-1445S-3026-SM-5O9BR 0.6
GTEX-11OF3-2926-SM-5HL78 0.5
GTEX-12WSA-2926-SM-5EQ4D 0.4
GTEX-ZZPT-3026-SM-5GZXH 0.4
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 13.3
Samples: 108

Max RPKM: 40.5
Min RPKM: 0.3
Std RPKM: 8.8
Median RPKM: 11.1
GTEX-ZUA1-0011-R10a-SM-51MT6 40.5
GTEX-12ZZY-0011-R10b-SM-5HL7W 35.6
GTEX-13O3O-0011-R10a-SM-5LUA9 31.4
GTEX-12WSC-0011-R10a-SM-5GU57 30.5
GTEX-12126-0011-R10b-SM-5BC6T 29.6
GTEX-14BIN-0011-R10a-SM-5S2UA 27.2
GTEX-13X6J-0011-R10b-SM-5PNWA 26.9
GTEX-S7SE-0011-R10A-SM-2XCDF 26.9
GTEX-WL46-0011-R10A-SM-3MJFQ 26.9
GTEX-WVLH-0011-R10A-SM-3MJFM 26.8
GTEX-13NYB-0011-R10a-SM-5KM43 26.6
GTEX-1313W-0011-R10b-SM-5DUXA 26.4
GTEX-13OVL-0011-R10a-SM-5L3GS 26.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC 26.0
GTEX-13SLX-0011-R10a-SM-5P9HV 25.3
GTEX-X4EP-0011-R10B-SM-4QASJ 25.0
GTEX-131YS-0011-R10b-SM-5EQ5N 24.5
GTEX-147GR-0011-R10b-SM-5S2UM 24.0
GTEX-145MH-0011-R10b-SM-5PNUK 23.9
GTEX-T6MN-0011-R10A-SM-32QP7 23.9
GTEX-12WSE-0011-R10b-SM-5P9JV 22.1
GTEX-13O3Q-0011-R10b-SM-5KM39 21.5
GTEX-YFC4-0011-R10a-SM-4SOK5 21.4
GTEX-Y8DK-0011-R10A-SM-4SOK1 20.8
GTEX-13OW7-0011-R10a-SM-5L3H3 19.9
GTEX-T5JC-0011-R10A-SM-32PM2 19.9
GTEX-12WSM-0011-R10a-SM-5DUWV 19.1
GTEX-131XH-0011-R10a-SM-5EGLJ 19.1
GTEX-14ASI-0011-R10b-SM-5S2VZ 18.9
GTEX-13G51-0011-R10b-SM-5LZYF 18.8
GTEX-N7MS-0011-R10A-SM-2HMJK 18.8
GTEX-YJ89-0011-R10a-SM-4SOK9 18.5
GTEX-WZTO-0011-R10B-SM-4E3KB 18.4
GTEX-13JUV-0011-R10b-SM-5LZXR 18.3
GTEX-13FXS-0011-R10a-SM-5J2MA 17.6
GTEX-13OW8-0011-R10a-SM-5L3H6 17.1
GTEX-11ZUS-0011-R10b-SM-5BC79 16.2
GTEX-ZVZQ-0011-R10b-SM-51MRT 16.2
GTEX-12ZZX-0011-R10b-SM-5DUWK 16.0
GTEX-QVUS-0011-R10A-SM-3GIK3 15.8
GTEX-Q2AG-0011-R10A-SM-2HMLA 15.1
GTEX-12WSF-0011-R10a-SM-5LZVH 14.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 14.2
GTEX-13OW6-0011-R10a-SM-5L3HE 14.2
GTEX-13FLW-0011-R10b-SM-5LZZF 14.1
GTEX-145MG-0011-R10a-SM-5PNWG 13.5
GTEX-WWYW-0011-R10A-SM-3NB35 13.4
GTEX-Z93S-0011-R10a-SM-4RGNM 12.7
GTEX-13X6K-0011-R10a-SM-5P9JR 12.4
GTEX-QMR6-0011-R10A-SM-32PKO 12.1
GTEX-TSE9-0011-R10A-SM-3DB7O 11.8
GTEX-12WSH-0011-R10a-SM-5LZUS 11.7
GTEX-P44H-0011-R10A-SM-2XCEK 11.5
GTEX-13RTJ-0011-R10b-SM-5O9CW 11.4
GTEX-13CZV-0011-R10b-SM-5LZYD 10.7
GTEX-ZDXO-0011-R10a-SM-4WWD8 10.6
GTEX-145LS-0011-R10a-SM-5PNUQ 10.5
GTEX-139TS-0011-R10a-SM-5K7TU 10.4
GTEX-13N1W-0011-R10b-SM-5MR4H 10.1
GTEX-13QJC-0011-R10a-SM-5SI63 10.0
GTEX-13S7M-0011-R10b-SM-5PNZB 9.8
GTEX-XLM4-0011-R10A-SM-4AT5P 9.6
GTEX-N7MT-0011-R10A-SM-2I3E1 9.5
GTEX-QVJO-0011-R10A-SM-2S1QJ 9.2
GTEX-ZAB4-0011-R10a-SM-4SOKH 9.2
GTEX-13QIC-0011-R10a-SM-5O9C7 9.1
GTEX-11H98-0011-R10b-SM-5NQ98 8.9
GTEX-147F4-0011-R10b-SM-5S2WC 8.9
GTEX-14BIL-0011-R10a-SM-5SI75 8.9
GTEX-X585-0011-R10A-SM-46MUY 8.6
GTEX-RVPU-0011-R10A-SM-2XCAH 8.2
GTEX-12WSD-0011-R10b-SM-5GU79 8.1
GTEX-13N2G-0011-R10a-SM-5MR34 7.6
GTEX-NL3H-0011-R10A-SM-2I3E9 7.4
GTEX-QDT8-0011-R10A-SM-32PKG 7.3
GTEX-OXRO-0011-R10A-SM-2I5EH 7.1
GTEX-NL4W-0011-R10A-SM-2I3DY 7.0
GTEX-145LU-0011-R10a-SM-5PNWJ 6.9
GTEX-ZXG5-0011-R10a-SM-57WDD 6.5
GTEX-11WQK-0011-R10a-SM-5BC6R 6.1
GTEX-13FHO-0011-R10b-SM-5J2MM 5.9
GTEX-OXRN-0011-R10A-SM-2I5GC 5.9
GTEX-X4XX-0011-R10B-SM-46MWO 5.9
GTEX-NPJ7-0011-R10A-SM-2I3E5 5.5
GTEX-ZVT3-0011-R10b-SM-57WB6 5.5
GTEX-132Q8-0011-R10b-SM-5DUWZ 5.4
GTEX-13FTZ-0011-R10b-SM-5KLZS 5.4
GTEX-11WQC-0011-R10a-SM-57WCT 5.3
GTEX-12ZZW-0011-R10b-SM-5HL9X 5.3
GTEX-ZF28-0011-R10a-SM-4WWEH 5.2
GTEX-13NYS-0011-R10a-SM-5MR4S 5.0
GTEX-13NZA-0011-R10b-SM-5KM54 5.0
GTEX-13X6I-0011-R10a-SM-5PNWI 4.8
GTEX-X261-0011-R10B-SM-4E3JT 4.4
GTEX-13JVG-0011-R10b-SM-5KM2P 3.7
GTEX-ZE7O-0011-R10a-SM-57WAZ 3.7
GTEX-NPJ8-0011-R10A-SM-2YUMO 3.2
GTEX-13OVJ-0011-R10b-SM-5L3HT 2.8
GTEX-1477Z-0011-R10b-SM-5S2RF 2.6
GTEX-14753-0011-R10b-SM-5S2WE 2.2
GTEX-13IVO-0011-R10a-SM-5LZY3 2.0
GTEX-11GSP-0011-R10a-SM-5NQ7J 1.9
GTEX-13SLW-0011-R10a-SM-5S2UI 1.8
GTEX-131XW-0011-R10a-SM-5DUVA 1.1
GTEX-12WSA-0011-R10b-SM-5P9ET 1.0
GTEX-1445S-0011-R10a-SM-5PNWB 0.8
GTEX-XMD1-0011-R10A-SM-4AT4A 0.6
GTEX-ZV68-0011-R10a-SM-51MT7 0.3
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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