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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:16.5RPKM
FANTOM5:26.7Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Low
 

Antibody staining

Antibody HPA014429

 

Antibody CAB004588

 

Glial cells

Not detected   Not detected  

Neuronal cells

Low   Low  
   
   
   

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

16.5

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 16.5
Samples: 94

Max RPKM: 112
Min RPKM: 0.2
Std RPKM: 18.9
Median RPKM: 11.2
GTEX-PVOW-0011-R1A-SM-32PL6 112.0
GTEX-XOTO-0011-R1B-SM-4B65C 80.3
GTEX-WZTO-0011-R1B-SM-3NMAR 72.7
GTEX-ZUA1-0011-R1a-SM-4YCE2 71.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 66.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 39.6
GTEX-T5JC-0011-R1A-SM-32PM6 38.4
GTEX-131XH-0011-R1a-SM-5DUWA 35.2
GTEX-139TT-0011-R1a-SM-5LZVD 34.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 33.6
GTEX-RNOR-0011-R1A-SM-5SI8F 32.7
GTEX-13O3O-0011-R1b-SM-5KM2K 31.7
GTEX-13G51-0011-R1a-SM-5LZYR 31.6
GTEX-13FXS-0011-R1a-SM-5K7U6 31.5
GTEX-N7MS-0011-R1a-SM-2HMJG 30.6
GTEX-X585-0011-R1B-SM-46MVE 28.6
GTEX-13N1W-0011-R1b-SM-5MR4T 28.4
GTEX-13N2G-0011-R1b-SM-5MR3G 27.1
GTEX-S7SE-0011-R1A-SM-2XCDE 26.2
GTEX-1313W-0011-R1b-SM-5EQ4A 25.3
GTEX-13112-0011-R1b-SM-5HL7K 25.3
GTEX-131YS-0011-R1a-SM-5DUXC 24.5
GTEX-QVUS-0011-R1A-SM-3GAD2 23.9
GTEX-13JUV-0011-R1a-SM-5LZY4 23.2
GTEX-T6MN-0011-R1A-SM-32QOY 23.1
GTEX-1399T-0011-R1b-SM-5DUWN 23.0
GTEX-YFC4-0011-R1a-SM-4V6EH 22.5
GTEX-N7MT-0011-R1a-SM-5SI7S 20.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 20.7
GTEX-13NYB-0011-R1b-SM-5KM4F 20.3
GTEX-13OVL-0011-R1a-SM-5L3H5 19.9
GTEX-11GSO-0011-R1b-SM-57WD3 19.6
GTEX-145LS-0011-R1b-SM-5PNUP 19.2
GTEX-12WSM-0011-R1a-SM-5LZW6 18.2
GTEX-R55E-0011-R1A-SM-2TC6N 18.1
GTEX-12WSE-0011-R1b-SM-5GU4V 17.1
GTEX-13OW6-0011-R1a-SM-5L3HQ 17.0
GTEX-145MH-0011-R1b-SM-5PNWY 15.9
GTEX-WL46-0011-R1A-SM-3LK6M 15.7
GTEX-ZAB4-0011-R1a-SM-4RGNO 13.8
GTEX-YJ89-0011-R1a-SM-4RGLS 13.2
GTEX-13S7M-0011-R1b-SM-5PNZE 12.9
GTEX-12WSD-0011-R1b-SM-5LZVY 12.4
GTEX-QDT8-0011-R1A-SM-32PKS 12.0
GTEX-TSE9-0011-R1A-SM-3DB7E 11.7
GTEX-14ASI-0011-R1b-SM-5S2TY 11.6
GTEX-P44H-0011-R1A-SM-3NM8J 11.3
GTEX-13OW7-0011-R1b-SM-5L3HF 11.2
GTEX-12WSF-0011-R1a-SM-5DUVI 10.3
GTEX-WVLH-0011-R1A-SM-4MVOK 9.8
GTEX-13FLW-0011-R1b-SM-5LZX2 9.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 9.0
GTEX-144GL-0011-R1a-SM-5PNZ5 8.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 8.7
GTEX-13CF2-0011-R1a-SM-5LZY1 8.3
GTEX-13FHO-0011-R1b-SM-5KLZG 7.7
GTEX-WWYW-0011-R1A-SM-3TW8G 7.5
GTEX-13OW8-0011-R1a-SM-5L3HI 7.2
GTEX-13X6I-0011-R1b-SM-5PNZC 6.5
GTEX-QMR6-0011-R1A-SM-32PKW 6.1
GTEX-NL3H-0011-R1a-SM-48TDJ 5.6
GTEX-13OW5-0011-R1b-SM-5L3GE 5.2
GTEX-NPJ7-0011-R1a-SM-3GACT 5.0
GTEX-QVJO-0011-R1A-SM-2S1QI 4.8
GTEX-12WSH-0011-R1a-SM-5GU5V 4.2
GTEX-11ONC-0011-R1a-SM-57WD4 4.0
GTEX-13NYS-0011-R1b-SM-5MR55 3.7
GTEX-145LU-0011-R1a-SM-5Q5CE 3.6
GTEX-13RTL-0011-R1a-SM-5PNZ8 3.5
GTEX-NPJ8-0011-R1a-SM-33HCB 3.1
GTEX-132Q8-0011-R1a-SM-5EGLK 3.1
GTEX-UTHO-0011-R1A-SM-3GIJO 2.9
GTEX-ZVZQ-0011-R1a-SM-57WBU 2.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 2.5
GTEX-13JVG-0011-R1a-SM-5KM32 2.2
GTEX-PWO3-0011-R1A-SM-2I5EW 1.9
GTEX-11UD1-0011-R1b-SM-5BC7D 1.9
GTEX-13NZA-0011-R1b-SM-5LUAF 1.9
GTEX-11ZTS-0011-R1a-SM-5BC71 1.8
GTEX-139T8-0011-R1a-SM-5HL75 1.7
GTEX-13SLW-0011-R1a-SM-5S2W7 1.6
GTEX-13FHP-0011-R1b-SM-5K7XL 1.5
GTEX-X4XX-0011-R1B-SM-3P622 1.5
GTEX-ZF28-0011-R1a-SM-4WWD1 1.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 1.1
GTEX-13QJC-0011-R1b-SM-5S2UU 0.9
GTEX-1212Z-0011-R1b-SM-5BC72 0.8
GTEX-ZE7O-0011-R1a-SM-57WDM 0.6
GTEX-13FTY-0011-R1a-SM-5LZXE 0.4
GTEX-XMD1-0011-R1A-SM-4AT4C 0.4
GTEX-144GO-0011-R1a-SM-5PNWO 0.4
GTEX-12WSB-0011-R1b-SM-5P9EY 0.4
GTEX-13PDP-0011-R1a-SM-5PNX5 0.3
GTEX-11ZVC-0011-R1b-SM-5BC6M 0.2
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

26.7

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 26.7
FF:10169-103B7 60 years, female 46.3
FF:10374-105G5 89 years, female 24.3
FF:10153-102I9 76 years, female 9.3

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