Fields »
ABOUT
HELP
BLOG
RALA

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:29.6TPM
GTEx:13.1RPKM
FANTOM5:43.5Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Low
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA065232

  

Adipocytes

 Low  

Chondrocytes

 Low  

Fibroblasts

 Low  

Peripheral nerve

 Low  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Peripheral nerve:Low
 
 

Antibody staining

Antibody HPA065232

  

Adipocytes

 Low  

Fibroblasts

 Low  

Peripheral nerve

 Low  
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

29.6
N/A Female, age 80
Sample 1
TPM: 37.3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 33.9
N/A Female, age 57
Sample 3
TPM: 28.9
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 25.0
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 22.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

13.1

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 13.5
Samples: 350

Max RPKM: 36.7
Min RPKM: 6.7
Std RPKM: 3.3
Median RPKM: 13.1
GTEX-POYW-0726-SM-2XCEO 36.7
GTEX-ZE7O-0226-SM-5S2N1 26.3
GTEX-TSE9-0226-SM-3DB84 24.3
GTEX-ZYVF-0226-SM-5GIEG 23.0
GTEX-YJ8A-0526-SM-5IFHT 22.3
GTEX-S33H-1126-SM-2XCB6 22.2
GTEX-12126-0426-SM-5Q5AP 22.0
GTEX-145LS-0226-SM-5O9A5 22.0
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 12.5
Samples: 227

Max RPKM: 24.8
Min RPKM: 6.1
Std RPKM: 3
Median RPKM: 12
GTEX-11WQK-1526-SM-5EGKN 24.8
GTEX-12ZZX-1726-SM-5BC63 22.0
GTEX-ZYFC-1826-SM-5GZZA 21.6
GTEX-13PDP-1226-SM-5K7TW 21.1
GTEX-1313W-1626-SM-5J1OE 20.5
GTEX-13IVO-2426-SM-5K7V9 20.4
GTEX-WK11-2426-SM-3NMAA 20.1
GTEX-ZXG5-1626-SM-59HJK 19.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

43.5

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 43.5
FF:10010-101C1 65,65,76 years, mixed 43.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.