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TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:13.2TPM
GTEx:10.1RPKM
FANTOM5:3.6Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Medium
Cells in white pulp:High
 

Antibody staining

Antibody HPA020959

 

Antibody HPA053471

 

Cells in red pulp

Low   Medium  

Cells in white pulp

Low   High  
   
   
   

SPLEEN - HPA RNA-seq

Average TPM

13.2

overview Female, age 60
Sample 1
TPM: 12.5
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 11.3
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 10.7
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 11.6
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 19.8
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

10.1

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 10.1
Samples: 104

Max RPKM: 14.2
Min RPKM: 6.2
Std RPKM: 1.6
Median RPKM: 10.2
GTEX-OOBJ-0926-SM-48TDO 14.2
GTEX-11DXX-0726-SM-5H12X 13.5
GTEX-UPK5-1626-SM-4JBHI 12.9
GTEX-131XE-1126-SM-5EGHW 12.8
GTEX-1399R-0226-SM-5IJGG 12.7
GTEX-Q2AH-0226-SM-48U1I 12.7
GTEX-U3ZH-0126-SM-4DXUK 12.7
GTEX-XXEK-0126-SM-4BRVU 12.6
GTEX-11EQ9-0426-SM-5A5JY 12.4
GTEX-13S86-0126-SM-5S2PI 12.4
GTEX-XQ8I-1726-SM-4BOQB 12.2
GTEX-ZPU1-1026-SM-4YCEQ 12.2
GTEX-11NSD-0426-SM-5N9CR 12.1
GTEX-13VXT-1326-SM-5LU3Y 12.0
GTEX-12BJ1-0726-SM-5EGGF 11.9
GTEX-12WSG-0926-SM-5EGIH 11.9
GTEX-R55G-0226-SM-48FEI 11.8
GTEX-139T6-0226-SM-5IFGZ 11.7
GTEX-QV44-0126-SM-4R1KH 11.6
GTEX-W5WG-0626-SM-4SOID 11.5
GTEX-1211K-0426-SM-5FQTP 11.4
GTEX-13PL7-1126-SM-5MR5O 11.4
GTEX-13PVR-0326-SM-5RQJY 11.4
GTEX-YB5K-1926-SM-4VDT4 11.4
GTEX-12WSK-0126-SM-5GCO7 11.3
GTEX-XUJ4-0226-SM-4BOP8 11.3
GTEX-YFCO-0926-SM-5LUA5 11.3
GTEX-11LCK-0126-SM-5A5M5 11.2
GTEX-OIZH-0926-SM-48TBR 11.2
GTEX-1122O-0526-SM-5N9DM 11.0
GTEX-117YX-2126-SM-5GIEL 11.0
GTEX-X3Y1-0126-SM-4PQZA 11.0
GTEX-ZLFU-0526-SM-4WWBN 11.0
GTEX-146FR-1926-SM-5NQA6 10.9
GTEX-P4QS-0926-SM-48TBS 10.9
GTEX-132QS-0226-SM-5IFFZ 10.8
GTEX-13FH7-1326-SM-5IFG8 10.8
GTEX-13N11-0126-SM-5KM2Z 10.8
GTEX-PLZ6-0126-SM-48TC6 10.8
GTEX-Y5LM-0326-SM-4VBRN 10.8
GTEX-11VI4-0126-SM-5GU6Z 10.7
GTEX-PW2O-0126-SM-48TC8 10.7
GTEX-QCQG-0226-SM-48U28 10.7
GTEX-QDVN-0526-SM-48TZ4 10.7
GTEX-UJHI-0126-SM-4IHLP 10.6
GTEX-11P7K-0426-SM-5BC5H 10.5
GTEX-YEC4-0126-SM-4W21T 10.4
GTEX-11XUK-0426-SM-5EQML 10.3
GTEX-14E6E-1226-SM-5S2R5 10.3
GTEX-ZVZP-0726-SM-59HKA 10.3
GTEX-14DAR-0326-SM-5S2PS 10.2
GTEX-XMK1-0126-SM-4B65F 10.2
GTEX-13U4I-1626-SM-5IFFR 10.1
GTEX-ZVP2-0526-SM-51MSC 10.1
GTEX-13111-0126-SM-5EGHO 9.9
GTEX-ZYWO-0226-SM-5GZX3 9.9
GTEX-QV31-0126-SM-447BP 9.8
GTEX-X4LF-0226-SM-4QAS8 9.8
GTEX-XGQ4-0126-SM-4AT4H 9.8
GTEX-Y8LW-0126-SM-4VBS1 9.8
GTEX-ZYFG-0726-SM-5GIDX 9.8
GTEX-144GN-2126-SM-5O99D 9.7
GTEX-WHWD-0126-SM-4OORS 9.7
GTEX-Y3I4-0126-SM-4TT26 9.7
GTEX-ZAB5-0526-SM-5CVMU 9.7
GTEX-11P81-1326-SM-5GU5S 9.6
GTEX-WFON-0126-SM-4LVM9 9.6
GTEX-12WSJ-0526-SM-5GCOZ 9.5
GTEX-13CF3-0226-SM-5J1NW 9.5
GTEX-Y114-0726-SM-4TT6U 9.5
GTEX-Z9EW-0726-SM-5HL9H 9.4
GTEX-RUSQ-0126-SM-47JWV 9.3
GTEX-ZV6S-0826-SM-5NQ6Z 9.3
GTEX-1399S-0226-SM-5IFFG 9.2
GTEX-YB5E-0426-SM-5IFHR 9.1
GTEX-ZP4G-0326-SM-4YCEF 9.1
GTEX-146FQ-0626-SM-5LU9U 9.0
GTEX-ZDTT-1026-SM-5KM19 9.0
GTEX-U3ZN-0126-SM-4DXUM 8.9
GTEX-S4Z8-0226-SM-4AD5K 8.7
GTEX-XPVG-0626-SM-4B65B 8.7
GTEX-X585-1826-SM-4QAS3 8.6
GTEX-PX3G-0926-SM-48U12 8.5
GTEX-131XG-0426-SM-5IFGD 8.4
GTEX-ZLWG-0426-SM-4WWFA 8.4
GTEX-147F3-0126-SM-5NQBJ 8.2
GTEX-O5YT-0926-SM-48TDG 8.2
GTEX-Q734-0226-SM-48U1A 8.2
GTEX-S3XE-0626-SM-4AD6B 8.2
GTEX-VJYA-0126-SM-4KL1P 8.1
GTEX-XAJ8-0126-SM-47JYG 8.1
GTEX-XV7Q-0126-SM-4BRVK 8.1
GTEX-139YR-0426-SM-5IFFV 7.9
GTEX-Y3IK-0126-SM-4WWE9 7.9
GTEX-12WSN-0126-SM-5DUX5 7.8
GTEX-POMQ-0126-SM-48TD6 7.8
GTEX-QLQW-0126-SM-447BK 7.8
GTEX-QMRM-0226-SM-4R1K7 7.8
GTEX-145MN-0126-SM-5RQHY 7.7
GTEX-U4B1-0526-SM-4DXTK 7.6
GTEX-P4PP-0926-SM-48TBZ 7.4
GTEX-13X6H-0726-SM-5Q5BX 6.9
GTEX-T5JW-0126-SM-4DM6K 6.2
GTEX-ZZPU-0126-SM-5E446 6.2
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

3.6

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 3.6
FF:10025-101D7 39,50,70 years, male 3.6

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