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PAFAH1B1

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:41.7TPM
GTEx:24.3RPKM
FANTOM5:53.6Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Medium
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA020036

  

Antibody CAB004489

  

Adipocytes

 Low   Medium  

Chondrocytes

 Medium   Medium  

Fibroblasts

 Low   Medium  

Peripheral nerve

 Low   Medium  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Not detected
Peripheral nerve:Not available
 
 

Antibody staining

Antibody HPA020036

  

Antibody CAB004489

  

Adipocytes

 Medium   Medium  

Fibroblasts

 Not detected   Medium  

Peripheral nerve

 Medium  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

41.7
N/A Female, age 80
Sample 1
TPM: 38.3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 36.5
N/A Female, age 57
Sample 3
TPM: 33.3
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 51.8
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 48.6
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

24.3

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 25.8
Samples: 350

Max RPKM: 35
Min RPKM: 16.7
Std RPKM: 3.6
Median RPKM: 25.4
GTEX-OIZI-0226-SM-2XCEE 35.0
GTEX-WEY5-1926-SM-3GIL8 35.0
GTEX-ZYFC-0326-SM-5NQ7H 34.7
GTEX-P44H-0326-SM-2XCES 34.4
GTEX-131XF-2226-SM-5EQKG 34.3
GTEX-RVPU-2326-SM-2TF6R 34.3
GTEX-148VI-1726-SM-5S2W9 34.1
GTEX-PX3G-0226-SM-3NB2C 34.1
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 22.2
Samples: 227

Max RPKM: 29.9
Min RPKM: 13.4
Std RPKM: 2.9
Median RPKM: 22
GTEX-WOFM-0726-SM-3MJF8 29.9
GTEX-WFJO-1026-SM-3GIKL 29.3
GTEX-11NV4-1426-SM-5BC4W 29.0
GTEX-ZF29-0826-SM-5S2NP 28.9
GTEX-YECK-1426-SM-5IFHE 28.7
GTEX-ZPU1-1226-SM-5HL71 28.7
GTEX-13OW7-1126-SM-5K7V6 28.6
GTEX-139TU-1426-SM-5LZY9 28.4
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

53.6

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 53.6
FF:10010-101C1 65,65,76 years, mixed 53.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.