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PAFAH1B1
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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:29.5RPKM
FANTOM5:138.6Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Medium
 
 

Antibody staining

Antibody HPA020036

 

Antibody CAB004489

 

Glial cells

Medium   High  

Neuronal cells

Medium  
      
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

29.5

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 29.5
Samples: 117

Max RPKM: 72.3
Min RPKM: 9.8
Std RPKM: 9.8
Median RPKM: 28.5
GTEX-T2IS-0011-R5A-SM-32QP4 72.3
GTEX-PVOW-0011-R5A-SM-32PL7 53.0
GTEX-131YS-0011-R5b-SM-5K7YB 51.3
GTEX-P44H-0011-R5A-SM-2XCEX 50.8
GTEX-T6MN-0011-R5A-SM-32QPD 46.3
GTEX-13G51-0011-R5a-SM-5L3EB 45.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 44.5
GTEX-S7SE-0011-R5A-SM-2XCDA 44.1
GTEX-QVJO-0011-R5A-SM-2S1QM 43.5
GTEX-UTHO-0011-R5A-SM-3GIJD 43.1
GTEX-WHSE-0011-R5A-SM-3P5ZO 42.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 41.1
GTEX-WVLH-0011-R5A-SM-3MJFW 40.8
GTEX-1313W-0011-R5b-SM-5L3EP 40.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40.5
GTEX-QMR6-0011-R5A-SM-32PKT 40.3
GTEX-N7MS-0011-R5a-SM-2HMK8 39.2
GTEX-13X6J-0011-R5b-SM-5PNWT 38.5
GTEX-WL46-0011-R5A-SM-3LK6V 38.3
GTEX-12WSC-0011-R5b-SM-5CVNS 38.2
GTEX-R55E-0011-R5A-SM-2TC5N 36.7
GTEX-WWYW-0011-R5A-SM-3NB3E 36.7
GTEX-N7MT-0011-R5a-SM-2I3G6 36.5
GTEX-ZUA1-0011-R5b-SM-51MTG 36.4
GTEX-1399T-0011-R5b-SM-5IJDK 35.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 35.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 35.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 35.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 35.3
GTEX-145MH-0011-R5a-SM-5P9JT 35.3
GTEX-13O3O-0011-R5b-SM-5KM44 35.0
GTEX-145LS-0011-R5a-SM-5SI65 35.0
GTEX-11OF3-0011-R5a-SM-57WB4 34.9
GTEX-X585-0011-R5A-SM-46MVI 34.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 34.7
GTEX-11H98-0011-R5b-SM-57WCF 34.3
GTEX-14BIM-0011-R5b-SM-5S2RM 34.2
GTEX-Z93S-0011-R5b-SM-4RGNI 33.9
GTEX-11GSP-0011-R5a-SM-57WBE 33.3
GTEX-13VXU-0011-R5a-SM-5O9D7 33.3
GTEX-T5JC-0011-R5A-SM-32PLK 33.0
GTEX-11NV4-0011-R5a-SM-5NQ88 32.8
GTEX-14ABY-0011-R5b-SM-5SI7B 32.6
GTEX-13X6K-0011-R5b-SM-5PNUE 32.5
GTEX-13OW6-0011-R5a-SM-5O9BK 31.8
GTEX-13X6I-0011-R5a-SM-5PNWW 31.4
GTEX-13SLX-0011-R5a-SM-5O9BV 31.3
GTEX-12WSF-0011-R5a-SM-5HL8K 31.2
GTEX-132Q8-0011-R5a-SM-5IJDM 31.2
GTEX-X4XX-0011-R5A-SM-46MWN 31.2
GTEX-12WSB-0011-R5b-SM-5GU67 31.1
GTEX-RU72-0011-R5A-SM-2TF6U 30.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 30.8
GTEX-13FXS-0011-R5b-SM-5LZYE 30.7
GTEX-13OVL-0011-R5b-SM-5L3FU 30.5
GTEX-139TT-0011-R5b-SM-5K7W8 30.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 30.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 29.2
GTEX-RVPV-0011-R5A-SM-2TF69 28.5
GTEX-NL4W-0011-R5a-SM-2I3GD 28.1
GTEX-XMD1-0011-R5A-SM-4AT47 28.1
GTEX-13NYS-0011-R5a-SM-5MR4D 27.7
GTEX-13OW7-0011-R5b-SM-5O9DM 27.6
GTEX-13JUV-0011-R5a-SM-5LZY5 27.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 27.3
GTEX-13S7M-0011-R5b-SM-5P9HS 27.1
GTEX-13CZV-0011-R5a-SM-5K7XA 27.0
GTEX-13FLV-0011-R5a-SM-5LZWT 27.0
GTEX-TSE9-0011-R5A-SM-3DB7J 26.9
GTEX-13NYB-0011-R5a-SM-5MR45 26.2
GTEX-13FLW-0011-R5a-SM-5LZX6 26.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 25.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 25.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 25.4
GTEX-NL3H-0011-R5a-SM-2I3GB 25.3
GTEX-YFC4-0011-R5a-SM-4RGLR 25.3
GTEX-ZE7O-0011-R5a-SM-57WBO 24.8
GTEX-12WSA-0011-R5b-SM-5GU5I 24.7
GTEX-13JVG-0011-R5a-SM-5MR4O 24.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 24.7
GTEX-13OW5-0011-R5b-SM-5L3FR 24.6
GTEX-RVPU-0011-R5A-SM-2XCAD 24.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 24.2
GTEX-14BIN-0011-R5b-SM-5SI78 23.7
GTEX-13OVH-0011-R5b-SM-5KM4L 23.5
GTEX-144GO-0011-R5a-SM-5PNUR 23.4
GTEX-12WSD-0011-R5b-SM-5CVNG 23.2
GTEX-ZXG5-0011-R5b-SM-57WBN 23.0
GTEX-XOTO-0011-R5A-SM-4B657 22.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 22.8
GTEX-OHPN-0011-R5A-SM-2I5FF 22.4
GTEX-1445S-0011-R5a-SM-5PNUS 22.0
GTEX-12ZZX-0011-R5a-SM-5HL89 21.6
GTEX-NPJ7-0011-R5a-SM-33HBK 21.1
GTEX-X261-0011-R5A-SM-3NMB4 20.8
GTEX-OXRN-0011-R5A-SM-2I5EF 20.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 20.3
GTEX-139TS-0011-R5b-SM-5J2MZ 20.0
GTEX-11WQC-0011-R5a-SM-5BC74 19.7
GTEX-144GL-0011-R5b-SM-5PNUJ 19.4
GTEX-13112-0011-R5b-SM-5DUV8 18.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 18.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 18.3
GTEX-ZVT3-0011-R5a-SM-51MSI 17.7
GTEX-13FHP-0011-R5b-SM-5LZY2 17.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 17.2
GTEX-13CIG-0011-R5b-SM-5L3F2 16.7
GTEX-ZV68-0011-R5a-SM-4YCDW 16.5
GTEX-S7PM-0011-R5A-SM-3NM8G 16.4
GTEX-12WSH-0011-R5b-SM-5P9F3 16.0
GTEX-YJ89-0011-R5a-SM-4V6GM 15.6
GTEX-11UD1-0011-R5b-SM-5P9FP 15.1
GTEX-139T8-0011-R5b-SM-5J1MO 14.3
GTEX-13CF2-0011-R5a-SM-5LZWS 13.8
GTEX-1477Z-0011-R5b-SM-5PNUO 12.4
GTEX-145MG-0011-R5b-SM-5S2VU 10.4
GTEX-13NZA-0011-R5b-SM-5KM4K 9.8
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

138.6

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 138.6
FF:10164-103B2 76 years, female 185.5
FF:10379-105H1 89 years, female 91.6

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