Tissue expression of PAFAH1B1 - Staining in colon

COLON - Expression summary

Protein expression

RNA expression

HPA:	37.3	TPM
GTEx:	28.0	RPKM
FANTOM5:	103.9	Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Medium
Glandular cells:	Medium
Peripheral nerve/ganglion:	High

Antibody staining	Antibody HPA020036	Antibody CAB004489
Endothelial cells	Medium	Medium
Glandular cells	Medium	High
Peripheral nerve/ganglion	High	Medium

COLON - HPA RNA-seq

Average TPM	37.3

Male, age 54

Sample 1
TPM: 34.5

Cell types%

Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25

Female, age 57

Sample 2
TPM: 31.5

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 80

Sample 3
TPM: 28.0

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 68

Sample 4
TPM: 45.1

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 68

Sample 5
TPM: 26.7

Cell types%

Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70

Female, age 61

Sample 6
TPM: 38.9

Cell types%

Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30

Male, age 80

Sample 7
TPM: 42.1

Cell types%

Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

Female, age 78

Sample 8
TPM: 37.5

Cell types%

Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50

Male, age 84

Sample 9
TPM: 43.5

Cell types%

Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35

Male, age 80

Sample 10
TPM: 35.6

Cell types%

Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45

Female, age 78

Sample 11
TPM: 43.8

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 69

Sample 12
TPM: 43.6

Cell types%

Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45

Female, age 72

Sample 13
TPM: 33.6

Cell types%

Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM	28.0

GTEx sample id

RPKM

Colon - Sigmoid

Colon - Sigmoid
RPKM: 31.3

Samples: 149

Max RPKM: 42.4
Min RPKM: 22.5
Std RPKM: 3.7
Median RPKM: 31

GTEX-148VJ-2426-SM-5NQ9Y

42.4

GTEX-13OW6-2226-SM-5N9FL

41.5

GTEX-Y9LG-1326-SM-4VBQB

39.6

GTEX-13U4I-2626-SM-5SI9C

39.5

GTEX-14E6C-2226-SM-5QGQG

39.5

GTEX-145ME-1126-SM-5SIAT

39.2

GTEX-ZYT6-2826-SM-5GICX

39.1

GTEX-13VXT-2026-SM-5L3EW

38.6

Show all

Colon - Transverse

Colon - Transverse
RPKM: 25.4

Samples: 196

Max RPKM: 40.1
Min RPKM: 10.7
Std RPKM: 5.5
Median RPKM: 24

GTEX-X5EB-0926-SM-46MVT

40.1

GTEX-13OVI-2026-SM-5J1MU

39.2

GTEX-14AS3-1126-SM-5Q5CR

39.2

GTEX-ZYFC-2626-SM-5NQ6S

39.1

GTEX-11TUW-2026-SM-5EQL8

38.6

GTEX-11O72-2226-SM-5PNW2

38.2

GTEX-YEC4-1926-SM-5IFHJ

37.7

GTEX-148VJ-2626-SM-5QGPI

36.7

Show all

COLON - FANTOM5 CAGE

Average Tags Per Million	103.9

FANTOM5 sample id

Sample description

Tags Per Million

Colon
Tags Per Million: 103.9

FF:10014-101C5

62,83,84 years, mixed

103.9