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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:926.1TPM
GTEx:206.4RPKM
FANTOM5:570.3Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA003570

 

Glandular cells

Medium  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

926.1

overview Male, age 65
Sample 1
TPM: 966.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 884.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 1009.3
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 845.0

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

206.4

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 206.4
Samples: 88

Max RPKM: 483.4
Min RPKM: 76.7
Std RPKM: 81.4
Median RPKM: 185
GTEX-148VJ-2226-SM-5NQ9M 483.4
GTEX-WRHK-1026-SM-4MVOD 411.9
GTEX-VUSG-1726-SM-4KKZL 399.8
GTEX-11VI4-1626-SM-5EQKO 384.0
GTEX-1399U-2126-SM-5IFEZ 357.0
GTEX-ZC5H-2326-SM-4WAYT 339.0
GTEX-WH7G-1626-SM-4LVMY 321.4
GTEX-WFJO-0926-SM-4LVM2 316.8
GTEX-UPK5-2026-SM-4JBIM 309.7
GTEX-X15G-1426-SM-4PQZK 304.4
GTEX-13O61-1326-SM-5KM31 303.2
GTEX-1192X-2526-SM-59868 302.6
GTEX-13FH7-1226-SM-5IJFK 300.2
GTEX-ZLFU-1526-SM-4WWBT 298.7
GTEX-11NSD-1726-SM-5N9C3 292.6
GTEX-131XG-1726-SM-5LZUR 287.5
GTEX-13QBU-1926-SM-5IJEW 274.0
GTEX-12BJ1-1926-SM-5HL9Z 270.9
GTEX-11P82-0826-SM-5P9GU 267.9
GTEX-145ME-0926-SM-5O9AR 267.7
GTEX-11XUK-1426-SM-5EQMG 258.6
GTEX-Z9EW-0926-SM-5CVMM 258.4
GTEX-WEY5-1526-SM-4LMJF 257.8
GTEX-14E6E-1626-SM-5RQI7 256.6
GTEX-13OVI-1926-SM-5IJCG 247.1
GTEX-Y3IK-1726-SM-4YCCR 243.4
GTEX-XMK1-1826-SM-4B66F 236.3
GTEX-ZVP2-1726-SM-5GU5P 235.4
GTEX-ZEX8-1826-SM-57WBH 235.3
GTEX-117YX-0326-SM-5GICL 231.5
GTEX-ZTPG-2626-SM-57WFX 231.2
GTEX-13111-1426-SM-5DUW3 228.7
GTEX-12WSK-1526-SM-5CVNO 227.8
GTEX-13RTK-0826-SM-5Q5C6 226.7
GTEX-Y5LM-1626-SM-4VDTB 223.9
GTEX-139T6-1026-SM-5IJGC 216.0
GTEX-ZQG8-2526-SM-57WEQ 211.4
GTEX-ZP4G-1626-SM-57WGD 194.8
GTEX-ZYWO-1526-SM-5SIAL 193.9
GTEX-11I78-1126-SM-5A5K5 188.8
GTEX-VJYA-0926-SM-4KL1N 188.8
GTEX-WFG8-1626-SM-4LVMB 188.7
GTEX-XGQ4-1326-SM-4GIDU 185.8
GTEX-ZQUD-0926-SM-57WE3 185.1
GTEX-ZF2S-1726-SM-57WFT 185.0
GTEX-ZZ64-0526-SM-5GZXM 184.8
GTEX-ZVT2-2126-SM-5NQ93 184.4
GTEX-XAJ8-0526-SM-47JYK 184.3
GTEX-ZPIC-2326-SM-57WDW 183.7
GTEX-1399S-2026-SM-5KM4B 183.0
GTEX-111CU-1326-SM-5NQ8L 182.7
GTEX-WFG7-1726-SM-4LVME 180.9
GTEX-Y114-1426-SM-4TT6W 178.0
GTEX-ZA64-1226-SM-5HL7B 175.9
GTEX-13113-1226-SM-5EGHT 174.7
GTEX-11P7K-1626-SM-5GU63 173.5
GTEX-X5EB-1626-SM-4E3IV 173.0
GTEX-11DXZ-1326-SM-5H11X 172.0
GTEX-13O21-1026-SM-5IJDU 171.1
GTEX-11DXX-1626-SM-5H11H 168.9
GTEX-1399R-2026-SM-5K7WN 164.1
GTEX-13CF3-1226-SM-5LZXN 157.0
GTEX-11EQ9-1326-SM-5985X 152.9
GTEX-XXEK-1026-SM-4BRUW 152.5
GTEX-ZXES-1526-SM-5NQ95 150.4
GTEX-133LE-1426-SM-5IFH1 150.1
GTEX-131XF-1326-SM-5GCMQ 147.4
GTEX-XBED-1426-SM-4AT4G 147.2
GTEX-139YR-2226-SM-5IFFW 144.8
GTEX-ZYFG-2026-SM-5E43Y 143.3
GTEX-XUZC-1426-SM-4BRV3 141.3
GTEX-YEC4-1726-SM-4W21E 139.0
GTEX-145LT-1026-SM-5LU9O 129.7
GTEX-WQUQ-2426-SM-4MVNW 126.0
GTEX-14DAR-1426-SM-5RQIR 125.0
GTEX-ZTX8-0526-SM-59HLD 111.1
GTEX-ZLV1-1126-SM-4WWBW 110.4
GTEX-ZVZP-1826-SM-5GZXB 107.3
GTEX-13FTW-2026-SM-5IJE2 106.3
GTEX-13PL7-2626-SM-5IFH4 105.5
GTEX-Y9LG-1626-SM-5IFHM 103.0
GTEX-YB5E-1526-SM-5IFIE 101.0
GTEX-13D11-0726-SM-5LZZB 100.6
GTEX-ZPCL-1726-SM-57WEO 96.5
GTEX-1122O-1326-SM-5H11F 94.8
GTEX-YF7O-1826-SM-5IFIU 89.9
GTEX-ZTSS-0926-SM-59865 88.8
GTEX-111YS-1426-SM-5GID8 76.7
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

570.3

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 570.3
FF:10024-101D6 15,40,85 years, mixed 570.3

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