Tissue expression of HFE - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	10.9	TPM
GTEx:	2.1	RPKM
FANTOM5:	3.1	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Low
Chondrocytes:	Not detected

Antibody staining	Antibody HPA017276	Antibody HPA053470
Adipocytes	Not detected
Fibroblasts	Low	Not detected
Peripheral nerve	Low
Chondrocytes	Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Low

Antibody staining	Antibody HPA017276	Antibody HPA053470
Adipocytes	Low	Not detected
Fibroblasts	Not detected	Not detected
Peripheral nerve	Low	Low

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	10.9

Female, age 80

Sample 1
TPM: 6.8

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 7.3

Female, age 57

Sample 3
TPM: 5.9

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 9.3

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 25.0

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	2.1

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 2.1

Samples: 350

Max RPKM: 5.7
Min RPKM: 0.3
Std RPKM: 0.8
Median RPKM: 1.9

GTEX-ZVZO-0226-SM-5A5LA

5.7

GTEX-13FHP-0226-SM-5K7WD

4.5

GTEX-PX3G-0226-SM-3NB2C

4.5

GTEX-Q734-1826-SM-2I3EL

4.4

GTEX-TML8-2026-SM-32QOP

4.4

GTEX-QDT8-0226-SM-32PL4

4.3

GTEX-X88G-0226-SM-4GIE4

4.3

GTEX-ZEX8-2326-SM-5S2MN

4.2

Show all

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 2.2

Samples: 227

Max RPKM: 6.4
Min RPKM: 0.2
Std RPKM: 1
Median RPKM: 1.9

GTEX-ZT9X-0926-SM-5O9C4

6.4

GTEX-UPK5-1826-SM-3GAEB

5.2

GTEX-ZPU1-1226-SM-5HL71

4.6

GTEX-W5X1-1426-SM-3GIKH

4.5

GTEX-13X6I-1526-SM-5SIAC

4.4

GTEX-Y5V5-0226-SM-5S2N8

4.4

GTEX-132NY-1126-SM-5PNVE

4.3

GTEX-ZAB5-1126-SM-5Q5AD

4.3

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	3.1

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 3.1

FF:10010-101C1

65,65,76 years, mixed

3.1