Tissue expression of BRCA1 - Staining in skin 2

SKIN - Expression summary

Protein expression

RNA expression

HPA:	7.0	TPM
GTEx:	0.8	RPKM

SKIN 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	Medium
Keratinocytes:	Medium
Langerhans:	Medium
Melanocytes:	Medium

Antibody staining	Antibody HPA034966	Antibody CAB001946
Fibroblasts	Medium	Not detected
Keratinocytes	Medium	Low
Langerhans	Medium	Not detected
Melanocytes	Medium	Low

SKIN 2 - Annotated protein expression

Annotated protein
expression

Epidermal cells:	High

Antibody staining	Antibody HPA034966	Antibody CAB001946
Epidermal cells	High	High

SKIN - HPA RNA-seq

Average TPM	7.0

Female, age 34

Sample 1
TPM: 7.8

Cell types%

Keratinocytes: 60
Other cell types: 40

Female, age 30

Sample 2
TPM: 7.4

Cell types%

Keratinocytes: 55
Other cell types: 45

Male, age 57

Sample 3
TPM: 5.8

SKIN - GTEx RNA-seq

Average RPKM	0.8

GTEx sample id

RPKM

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 0.9

Samples: 250

Max RPKM: 2
Min RPKM: 0.1
Std RPKM: 0.3
Median RPKM: 0.8

GTEX-111VG-1626-SM-5EGIO

2.0

GTEX-12WSB-2926-SM-59HKL

2.0

GTEX-ZVTK-0226-SM-51MRG

2.0

GTEX-12WSC-2826-SM-5BC5Y

1.8

GTEX-13NYB-0126-SM-5J1MD

1.8

GTEX-145MF-0926-SM-5Q5EA

1.8

GTEX-WRHU-2826-SM-3MJG8

1.8

GTEX-13NZ9-2626-SM-5L3FK

1.7

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Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 0.8

Samples: 357

Max RPKM: 2.5
Min RPKM: 0.1
Std RPKM: 0.3
Median RPKM: 0.7

GTEX-WFG8-2226-SM-3GIL9

2.5

GTEX-ZVT3-0126-SM-5GU6I

1.9

GTEX-11EI6-0126-SM-5985R

1.7

GTEX-13OW6-0426-SM-5L3HM

1.7

GTEX-14BMV-0126-SM-5S2PO

1.7

GTEX-13FHP-0126-SM-5IJBG

1.6

GTEX-XMD2-0126-SM-4YCDU

1.6

GTEX-ZUA1-0126-SM-5GU76

1.6

Show all

SKIN - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue