We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
KDM5D
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA PROSTATE

GENE/PROTEIN

Antibody validation


Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

RNA expression

HPA:25.5TPM
GTEx:26.4RPKM
FANTOM5:33.5Tags Per Million

PROSTATE - Annotated protein expression

 

Antibody staining

Antibody HPA049086

 

Antibody HPA060807

 

Glandular cells

Not detected   Medium  
   
   
   

PROSTATE - HPA RNA-seq

Average TPM

25.5

overview Male, age 62
Sample 1
TPM: 14.9
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65
Sample 2
TPM: 32.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65
Sample 3
TPM: 33.5
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68
Sample 4
TPM: 28.4
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60
Sample 5
TPM: 28.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66
Sample 6
TPM: 25.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63
Sample 7
TPM: 33.7
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66
Sample 8
TPM: 20.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58
Sample 9
TPM: 30.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seq

Average RPKM

26.4

GTEx sample id

RPKM

 

Prostate

Prostate
RPKM: 26.4
Samples: 106

Max RPKM: 43.2
Min RPKM: 14.4
Std RPKM: 5.8
Median RPKM: 25.7
GTEX-XAJ8-0626-SM-47JY4 43.2
GTEX-OOBJ-2026-SM-3NB1R 40.7
GTEX-QV44-1526-SM-4R1KI 38.7
GTEX-UTHO-2726-SM-4JBH9 38.3
GTEX-13O21-1126-SM-5N9EV 37.3
GTEX-13NYS-1026-SM-5KLZT 37.2
GTEX-V955-1826-SM-4JBIL 36.5
GTEX-13FHO-2826-SM-5K7ZA 35.4
GTEX-QMRM-1426-SM-4R1K8 35.1
GTEX-QLQ7-1326-SM-4R1JY 35.0
GTEX-RM2N-1126-SM-48FCY 34.6
GTEX-WFON-1626-SM-4LVMV 33.8
GTEX-S95S-1026-SM-4B64M 33.6
GTEX-SNOS-1026-SM-4DM4Y 33.5
GTEX-U4B1-1426-SM-4DXTX 33.5
GTEX-Q2AI-1126-SM-48U19 33.1
GTEX-ZTTD-2726-SM-57WFA 33.0
GTEX-RWSA-2026-SM-47JX8 32.7
GTEX-13O61-1726-SM-5KM46 31.8
GTEX-NPJ8-2426-SM-3MJHL 31.8
GTEX-OIZH-2026-SM-3NB1M 31.6
GTEX-S4Q7-1026-SM-4AD75 31.4
GTEX-T8EM-1826-SM-4DM7F 31.3
GTEX-131XF-1926-SM-5DUW4 31.0
GTEX-11NSD-0826-SM-5986S 30.9
GTEX-1399R-0526-SM-5IJEF 30.9
GTEX-145LV-1226-SM-5S2QH 30.7
GTEX-ZY6K-1526-SM-5GZXE 30.5
GTEX-111CU-1526-SM-5N9FS 30.1
GTEX-13FTW-1226-SM-5LZZ1 30.1
GTEX-S33H-1826-SM-4AD65 29.2
GTEX-11O72-2726-SM-5HL6K 29.1
GTEX-WH7G-1726-SM-4LVKY 29.1
GTEX-13N2G-1826-SM-5KM1I 29.0
GTEX-Y8E4-2126-SM-5RQHO 29.0
GTEX-111YS-1726-SM-5GIED 28.6
GTEX-139T6-1526-SM-5P9G6 28.6
GTEX-VJYA-1226-SM-3GIJ6 28.6
GTEX-117YX-1526-SM-5H12T 28.5
GTEX-11TT1-2026-SM-5EQM8 28.1
GTEX-ZLFU-1726-SM-4WWBU 28.1
GTEX-12C56-1326-SM-5FQSV 27.6
GTEX-U412-2026-SM-4DXSI 27.2
GTEX-ZZ64-0926-SM-5E44L 27.2
GTEX-WOFM-0326-SM-4OOSL 27.1
GTEX-XOTO-2826-SM-4B65I 26.7
GTEX-REY6-2126-SM-48FD9 26.4
GTEX-11DYG-2526-SM-5N9BB 26.3
GTEX-12ZZZ-2026-SM-5LZWJ 26.3
GTEX-11OF3-1726-SM-5GU5Q 26.1
GTEX-X5EB-1826-SM-4E3K8 26.1
GTEX-13OW8-0426-SM-5J2NR 25.8
GTEX-WFG8-1826-SM-4LVM4 25.8
GTEX-ZPU1-2026-SM-57WFI 25.6
GTEX-14BMV-2326-SM-5RQJ4 25.5
GTEX-PLZ6-1126-SM-3P5ZR 25.4
GTEX-YJ8A-1126-SM-5IFJU 25.4
GTEX-14C5O-2826-SM-5RQI6 24.4
GTEX-144GM-0826-SM-5O98R 24.2
GTEX-14ABY-0726-SM-5Q5DF 24.2
GTEX-YB5E-1826-SM-5IFI4 24.2
GTEX-12BJ1-1226-SM-5LUAE 24.1
GTEX-111FC-2026-SM-5GZYO 24.0
GTEX-QV31-1026-SM-4R1K3 24.0
GTEX-U3ZM-0926-SM-4DXSW 24.0
GTEX-V1D1-1926-SM-4JBGX 23.9
GTEX-Y9LG-1826-SM-4VBQC 23.9
GTEX-145LT-0626-SM-5O99E 23.8
GTEX-SJXC-2026-SM-4DM6N 23.8
GTEX-117YW-1426-SM-5EGGO 23.6
GTEX-13G51-2326-SM-5LZXV 23.6
GTEX-WFG7-1826-SM-3GIL1 23.5
GTEX-XGQ4-1826-SM-4AT6F 23.5
GTEX-XPVG-2026-SM-4B65E 23.2
GTEX-1399T-1226-SM-5P9J5 23.1
GTEX-WK11-2626-SM-4OOSK 23.1
GTEX-QEG4-2226-SM-4R1JM 23.0
GTEX-11P82-1126-SM-5BC5K 22.9
GTEX-XQ3S-2526-SM-4BOOG 22.9
GTEX-S3XE-1326-SM-4AD4H 22.8
GTEX-11P7K-0626-SM-5985Z 22.6
GTEX-ZDYS-1226-SM-5IJF3 22.3
GTEX-11ZUS-2126-SM-5N9E6 22.0
GTEX-13111-1326-SM-5GCNO 21.7
GTEX-U8XE-2526-SM-4E3IT 21.5
GTEX-13RTJ-2126-SM-5S2PZ 21.2
GTEX-146FQ-1726-SM-5QGPX 21.2
GTEX-ZVP2-0826-SM-59HJ6 21.2
GTEX-XMK1-1026-SM-4B65H 21.1
GTEX-SNMC-0926-SM-4DM5U 21.0
GTEX-14E6E-1126-SM-5S2R4 20.0
GTEX-ZT9W-1626-SM-4YCDQ 19.9
GTEX-148VJ-1826-SM-5Q5DV 19.6
GTEX-WZTO-0926-SM-4PQZ3 19.5
GTEX-YF7O-1926-SM-4W1YQ 19.5
GTEX-132NY-2826-SM-5P9G2 19.3
GTEX-11WQK-2726-SM-5EQMU 18.9
GTEX-OOBK-2025-SM-3LK5S 18.8
GTEX-11TUW-2126-SM-5GU7B 18.2
GTEX-ZTX8-1026-SM-5EGHD 18.1
GTEX-11EQ9-1726-SM-5HL6U 17.9
GTEX-132QS-1126-SM-5P9GC 17.8
GTEX-13FXS-2826-SM-5LZYC 16.3
GTEX-12696-2226-SM-5EQ65 15.9
GTEX-ZUA1-2826-SM-59HLE 14.9
GTEX-NFK9-2226-SM-3MJGP 14.4
Show all

PROSTATE - FANTOM5 CAGE

Average Tags Per Million

33.5

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 33.5
FF:10022-101D4 73,79,93 years, male 33.5

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.