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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

RNA expression

HPA:37.3TPM
GTEx:22.7RPKM
FANTOM5:35.2Tags Per Million

SMALL INTESTINE - Annotated protein expression

 

Antibody staining

Antibody HPA049086

 

Antibody HPA060807

 

Glandular cells

Not detected   Medium  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

37.3

overview Male, age 65
Sample 1
TPM: 33.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 42.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 38.7
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 34.5

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

22.7

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 22.7
Samples: 88

Max RPKM: 78.8
Min RPKM: 0
Std RPKM: 22.3
Median RPKM: 24.3
GTEX-VUSG-1726-SM-4KKZL 78.8
GTEX-UPK5-2026-SM-4JBIM 71.0
GTEX-WFJO-0926-SM-4LVM2 70.2
GTEX-WQUQ-2426-SM-4MVNW 64.1
GTEX-ZLFU-1526-SM-4WWBT 61.5
GTEX-11NSD-1726-SM-5N9C3 60.4
GTEX-Z9EW-0926-SM-5CVMM 56.8
GTEX-11P7K-1626-SM-5GU63 52.9
GTEX-XAJ8-0526-SM-47JYK 52.5
GTEX-12BJ1-1926-SM-5HL9Z 52.5
GTEX-13O61-1326-SM-5KM31 52.2
GTEX-ZVP2-1726-SM-5GU5P 50.5
GTEX-14E6E-1626-SM-5RQI7 50.4
GTEX-WH7G-1626-SM-4LVMY 50.1
GTEX-ZEX8-1826-SM-57WBH 48.2
GTEX-1399R-2026-SM-5K7WN 47.6
GTEX-XXEK-1026-SM-4BRUW 47.3
GTEX-11DXZ-1326-SM-5H11X 47.2
GTEX-VJYA-0926-SM-4KL1N 46.3
GTEX-XBED-1426-SM-4AT4G 39.4
GTEX-139YR-2226-SM-5IFFW 38.1
GTEX-11EQ9-1326-SM-5985X 37.9
GTEX-11P82-0826-SM-5P9GU 37.5
GTEX-131XF-1326-SM-5GCMQ 36.8
GTEX-ZZ64-0526-SM-5GZXM 35.9
GTEX-13O21-1026-SM-5IJDU 34.5
GTEX-148VJ-2226-SM-5NQ9M 34.2
GTEX-XGQ4-1326-SM-4GIDU 34.0
GTEX-YF7O-1826-SM-5IFIU 33.6
GTEX-ZVZP-1826-SM-5GZXB 32.9
GTEX-13RTK-0826-SM-5Q5C6 31.9
GTEX-139T6-1026-SM-5IJGC 31.7
GTEX-ZTX8-0526-SM-59HLD 31.3
GTEX-WFG7-1726-SM-4LVME 30.2
GTEX-ZTSS-0926-SM-59865 29.6
GTEX-1192X-2526-SM-59868 28.5
GTEX-13FTW-2026-SM-5IJE2 28.3
GTEX-111YS-1426-SM-5GID8 28.0
GTEX-117YX-0326-SM-5GICL 27.4
GTEX-Y9LG-1626-SM-5IFHM 26.3
GTEX-X5EB-1626-SM-4E3IV 25.9
GTEX-YB5E-1526-SM-5IFIE 25.8
GTEX-145LT-1026-SM-5LU9O 24.9
GTEX-13111-1426-SM-5DUW3 24.6
GTEX-14DAR-1426-SM-5RQIR 23.9
GTEX-ZA64-1226-SM-5HL7B 23.5
GTEX-XMK1-1826-SM-4B66F 23.0
GTEX-YEC4-1726-SM-4W21E 22.4
GTEX-ZQUD-0926-SM-57WE3 21.1
GTEX-111CU-1326-SM-5NQ8L 19.7
GTEX-WFG8-1626-SM-4LVMB 15.0
GTEX-WRHK-1026-SM-4MVOD 0.1
GTEX-1399U-2126-SM-5IFEZ 0.1
GTEX-11I78-1126-SM-5A5K5 0.0
GTEX-11VI4-1626-SM-5EQKO 0.0
GTEX-ZLV1-1126-SM-4WWBW 0.0
GTEX-ZP4G-1626-SM-57WGD 0.0
GTEX-ZPCL-1726-SM-57WEO 0.0
GTEX-ZPIC-2326-SM-57WDW 0.0
GTEX-ZQG8-2526-SM-57WEQ 0.0
GTEX-13D11-0726-SM-5LZZB 0.0
GTEX-ZTPG-2626-SM-57WFX 0.0
GTEX-11XUK-1426-SM-5EQMG 0.0
GTEX-11DXX-1626-SM-5H11H 0.0
GTEX-145ME-0926-SM-5O9AR 0.0
GTEX-ZVT2-2126-SM-5NQ93 0.0
GTEX-1122O-1326-SM-5H11F 0.0
GTEX-ZXES-1526-SM-5NQ95 0.0
GTEX-ZYFG-2026-SM-5E43Y 0.0
GTEX-ZYWO-1526-SM-5SIAL 0.0
GTEX-13FH7-1226-SM-5IJFK 0.0
GTEX-Y5LM-1626-SM-4VDTB 0.0
GTEX-WEY5-1526-SM-4LMJF 0.0
GTEX-1399S-2026-SM-5KM4B 0.0
GTEX-133LE-1426-SM-5IFH1 0.0
GTEX-131XG-1726-SM-5LZUR 0.0
GTEX-XUZC-1426-SM-4BRV3 0.0
GTEX-13113-1226-SM-5EGHT 0.0
GTEX-Y114-1426-SM-4TT6W 0.0
GTEX-Y3IK-1726-SM-4YCCR 0.0
GTEX-ZF2S-1726-SM-57WFT 0.0
GTEX-13OVI-1926-SM-5IJCG 0.0
GTEX-13PL7-2626-SM-5IFH4 0.0
GTEX-13QBU-1926-SM-5IJEW 0.0
GTEX-12WSK-1526-SM-5CVNO 0.0
GTEX-13CF3-1226-SM-5LZXN 0.0
GTEX-ZC5H-2326-SM-4WAYT 0.0
GTEX-X15G-1426-SM-4PQZK 0.0
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

35.2

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 35.2
FF:10024-101D6 15,40,85 years, mixed 35.2

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