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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:12.0TPM
GTEx:6.2RPKM
FANTOM5:33.9Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA002022

  

Antibody CAB004290

  

Adipocytes

 Medium   Medium  

Fibroblasts

 Not detected   Low  

Peripheral nerve

 Medium  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA002022

  

Antibody CAB004290

  

Adipocytes

 Not detected   Medium  

Fibroblasts

 Not detected   Medium  

Peripheral nerve

 Low  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

12.0
N/A Female, age 80
Sample 1
TPM: 5.1
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 3.9
N/A Female, age 57
Sample 3
TPM: 3.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 18.2
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 29.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

6.2

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 5.6
Samples: 350

Max RPKM: 24.7
Min RPKM: 0.9
Std RPKM: 3
Median RPKM: 5.3
GTEX-13NYS-0226-SM-5MR49 24.7
GTEX-Q734-1826-SM-2I3EL 19.6
GTEX-111VG-2326-SM-5N9BK 18.8
GTEX-ZVZO-0226-SM-5A5LA 16.5
GTEX-11GSO-2326-SM-5A5LX 15.9
GTEX-13JVG-0226-SM-5J1MW 15.2
GTEX-13O3Q-2326-SM-5KM3G 14.9
GTEX-111CU-1826-SM-5GZYN 13.6
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 7.2
Samples: 227

Max RPKM: 37.6
Min RPKM: 1.2
Std RPKM: 4.5
Median RPKM: 6.3
GTEX-ZVZP-1126-SM-5GICU 37.6
GTEX-Y9LG-1226-SM-4VBQA 31.0
GTEX-11EM3-1126-SM-5A5KM 22.1
GTEX-13FHO-2026-SM-5J1OA 20.5
GTEX-13X6I-1526-SM-5SIAC 17.9
GTEX-ZDYS-2226-SM-5S2MI 17.8
GTEX-14A6H-1026-SM-5SIAZ 17.6
GTEX-13N11-1826-SM-5IJDS 16.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

33.9

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 33.9
FF:10010-101C1 65,65,76 years, mixed 33.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.