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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:1551.5TPM
GTEx:295.9RPKM
FANTOM5:1715.3Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA052787

 

Antibody HPA059301

 

Glandular cells

High   High  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

1551.5

overview Male, age 65
Sample 1
TPM: 821.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 1616.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 2174.3
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 1593.3

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

295.9

GTEx sample id

RPKM

111.1213.2450.90.7923.201002003004005006007008009001,0001,100
 
111.1213.2450.90.7923.201002003004005006007008009001,0001,100

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 295.9
Samples: 88

Max RPKM: 1118.5
Min RPKM: 0.7
Std RPKM: 244.6
Median RPKM: 213.1
GTEX-YB5E-1526-SM-5IFIE 1118.5
GTEX-14DAR-1426-SM-5RQIR 923.2
GTEX-139YR-2226-SM-5IFFW 868.4
GTEX-ZYFG-2026-SM-5E43Y 812.9
GTEX-ZVZP-1826-SM-5GZXB 710.4
GTEX-13D11-0726-SM-5LZZB 704.6
GTEX-11P7K-1626-SM-5GU63 695.4
GTEX-ZTX8-0526-SM-59HLD 680.3
GTEX-11DXZ-1326-SM-5H11X 679.2
GTEX-13PL7-2626-SM-5IFH4 640.2
GTEX-ZTSS-0926-SM-59865 611.9
GTEX-ZPCL-1726-SM-57WEO 582.5
GTEX-Y9LG-1626-SM-5IFHM 565.5
GTEX-139T6-1026-SM-5IJGC 533.9
GTEX-ZXES-1526-SM-5NQ95 527.6
GTEX-XGQ4-1326-SM-4GIDU 526.6
GTEX-ZA64-1226-SM-5HL7B 515.6
GTEX-ZLV1-1126-SM-4WWBW 509.2
GTEX-XBED-1426-SM-4AT4G 505.5
GTEX-13113-1226-SM-5EGHT 499.6
GTEX-1122O-1326-SM-5H11F 498.3
GTEX-145LT-1026-SM-5LU9O 468.4
GTEX-1399R-2026-SM-5K7WN 445.0
GTEX-Y5LM-1626-SM-4VDTB 438.6
GTEX-ZTPG-2626-SM-57WFX 438.0
GTEX-ZLFU-1526-SM-4WWBT 414.8
GTEX-YEC4-1726-SM-4W21E 391.7
GTEX-131XF-1326-SM-5GCMQ 390.2
GTEX-XXEK-1026-SM-4BRUW 388.6
GTEX-X5EB-1626-SM-4E3IV 386.0
GTEX-11I78-1126-SM-5A5K5 375.5
GTEX-13RTK-0826-SM-5Q5C6 374.3
GTEX-133LE-1426-SM-5IFH1 363.2
GTEX-1399S-2026-SM-5KM4B 337.4
GTEX-11EQ9-1326-SM-5985X 334.2
GTEX-XUZC-1426-SM-4BRV3 296.1
GTEX-ZEX8-1826-SM-57WBH 280.3
GTEX-YF7O-1826-SM-5IFIU 275.4
GTEX-14E6E-1626-SM-5RQI7 274.0
GTEX-13FTW-2026-SM-5IJE2 269.0
GTEX-13CF3-1226-SM-5LZXN 242.6
GTEX-ZYWO-1526-SM-5SIAL 226.9
GTEX-WFG7-1726-SM-4LVME 221.7
GTEX-ZQG8-2526-SM-57WEQ 215.9
GTEX-12BJ1-1926-SM-5HL9Z 210.4
GTEX-ZZ64-0526-SM-5GZXM 209.7
GTEX-ZPIC-2326-SM-57WDW 208.3
GTEX-11P82-0826-SM-5P9GU 190.1
GTEX-ZVT2-2126-SM-5NQ93 187.8
GTEX-111YS-1426-SM-5GID8 184.9
GTEX-WFJO-0926-SM-4LVM2 178.0
GTEX-Y3IK-1726-SM-4YCCR 176.0
GTEX-11DXX-1626-SM-5H11H 175.9
GTEX-ZVP2-1726-SM-5GU5P 157.3
GTEX-11XUK-1426-SM-5EQMG 155.5
GTEX-11VI4-1626-SM-5EQKO 154.2
GTEX-Y114-1426-SM-4TT6W 153.5
GTEX-1399U-2126-SM-5IFEZ 152.8
GTEX-145ME-0926-SM-5O9AR 151.1
GTEX-WRHK-1026-SM-4MVOD 145.2
GTEX-13QBU-1926-SM-5IJEW 144.7
GTEX-11NSD-1726-SM-5N9C3 142.8
GTEX-13O61-1326-SM-5KM31 134.9
GTEX-ZP4G-1626-SM-57WGD 133.5
GTEX-13O21-1026-SM-5IJDU 129.2
GTEX-XAJ8-0526-SM-47JYK 112.2
GTEX-WFG8-1626-SM-4LVMB 107.8
GTEX-WH7G-1626-SM-4LVMY 104.2
GTEX-VJYA-0926-SM-4KL1N 91.9
GTEX-12WSK-1526-SM-5CVNO 90.2
GTEX-13FH7-1226-SM-5IJFK 85.0
GTEX-WQUQ-2426-SM-4MVNW 84.1
GTEX-Z9EW-0926-SM-5CVMM 75.7
GTEX-X15G-1426-SM-4PQZK 48.9
GTEX-13OVI-1926-SM-5IJCG 45.2
GTEX-ZQUD-0926-SM-57WE3 41.7
GTEX-131XG-1726-SM-5LZUR 28.1
GTEX-ZF2S-1726-SM-57WFT 16.9
GTEX-VUSG-1726-SM-4KKZL 15.8
GTEX-148VJ-2226-SM-5NQ9M 12.8
GTEX-117YX-0326-SM-5GICL 9.8
GTEX-111CU-1326-SM-5NQ8L 8.8
GTEX-13111-1426-SM-5DUW3 8.2
GTEX-XMK1-1826-SM-4B66F 6.5
GTEX-WEY5-1526-SM-4LMJF 5.5
GTEX-ZC5H-2326-SM-4WAYT 5.1
GTEX-1192X-2526-SM-59868 1.1
GTEX-UPK5-2026-SM-4JBIM 0.7
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

1715.3

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 1715.3
FF:10024-101D6 15,40,85 years, mixed 1715.3

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.