Tissue expression of NCDN - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	8.6	TPM
GTEx:	5.9	RPKM
FANTOM5:	12.8	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA023676
Adipocytes	Not detected
Fibroblasts	Not detected
Peripheral nerve	Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA023676
Adipocytes	Not detected
Fibroblasts	Not detected
Peripheral nerve	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	8.6

Female, age 80

Sample 1
TPM: 7.0

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 4.2

Female, age 57

Sample 3
TPM: 5.9

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 16.2

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 9.9

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	5.9

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 5.2

Samples: 350

Max RPKM: 12.8
Min RPKM: 1.5
Std RPKM: 1.7
Median RPKM: 5.1

GTEX-XYKS-2726-SM-4E3IC

12.8

GTEX-11EQ8-0226-SM-5EQ5G

11.3

GTEX-NPJ8-0226-SM-48TBN

10.6

GTEX-113IC-0226-SM-5HL5C

10.3

GTEX-X88G-0226-SM-4GIE4

10.3

GTEX-XQ8I-0526-SM-4BOPS

9.1

GTEX-13OVL-0326-SM-5IJCS

9.0

GTEX-XMD2-0226-SM-4WWEE

9.0

Show all

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 6.9

Samples: 227

Max RPKM: 13.9
Min RPKM: 2.9
Std RPKM: 2
Median RPKM: 6.8

GTEX-ZAJG-1626-SM-5HL7I

13.9

GTEX-13N11-1826-SM-5IJDS

12.4

GTEX-Y5LM-0826-SM-4VDSW

12.3

GTEX-1339X-0726-SM-5L3FF

11.7

GTEX-133LE-0926-SM-5P9J1

11.5

GTEX-11DXY-0326-SM-5H12F

11.4

GTEX-13O3P-0926-SM-5IFFI

11.3

GTEX-XYKS-1826-SM-4E3JV

11.3

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	12.8

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 12.8

FF:10010-101C1

65,65,76 years, mixed

12.8