Tissue expression of NCDN - Staining in cerebellum

CEREBELLUM - Expression summary

Protein expression

RNA expression

GTEx:	131.9	RPKM
FANTOM5:	355.8	Tags Per Million

CEREBELLUM - Annotated protein expression

Annotated protein
expression

Cells in granular layer:	Medium
Cells in molecular layer:	Low
Purkinje cells:	Low

Antibody staining	Antibody HPA023676
Cells in granular layer	Medium
Cells in molecular layer	Low
Purkinje cells	Low

CEREBELLUM - HPA RNA-seq
Pending HPA RNA-seq analysis

CEREBELLUM - GTEx RNA-seq

Average RPKM	131.9

GTEx sample id

RPKM

Brain - Cerebellar Hemisphere

Brain - Cerebellar Hemisphere
RPKM: 121.0

Samples: 105

Max RPKM: 185.3
Min RPKM: 57.3
Std RPKM: 24.7
Median RPKM: 125.2

GTEX-131XH-0011-R11a-SM-5EGLN

185.3

GTEX-145LU-0011-R11b-SM-5P9JX

169.2

GTEX-13OW6-0011-R11a-SM-5L3H2

156.8

GTEX-12WSE-0011-R11b-SM-5P9JW

154.6

GTEX-14BIM-0011-R11b-SM-5S2RN

154.0

GTEX-13NYB-0011-R11a-SM-5KM3Q

151.7

GTEX-13O3Q-0011-R11b-SM-5KM2W

150.8

GTEX-Q2AG-0011-R11A-SM-2HMKZ

150.2

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Brain - Cerebellum

Brain - Cerebellum
RPKM: 141.2

Samples: 125

Max RPKM: 384.9
Min RPKM: 68.9
Std RPKM: 33
Median RPKM: 140.8

GTEX-11OF3-3126-SM-5GU5E

384.9

GTEX-WL46-2826-SM-3LK81

202.0

GTEX-11O72-2826-SM-5HL6W

200.2

GTEX-131XH-2926-SM-5LZU4

199.8

GTEX-13NYB-3226-SM-5J2ND

192.7

GTEX-13X6K-2826-SM-5O9DS

181.0

GTEX-12ZZY-2926-SM-5DUXO

176.0

GTEX-13S7M-3026-SM-5S2QQ

174.0

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CEREBELLUM - FANTOM5 CAGE

Average Tags Per Million	355.8

FANTOM5 sample id

Sample description

Tags Per Million

Cerebellum
Tags Per Million: 355.8

FF:10166-103B4	76 years, female	410.1
FF:10083-102B2	22-68 years, mixed	301.4