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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:285.2TPM
GTEx:229.4RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Medium
Neuropil:Medium
 

Antibody staining

Antibody HPA023676

 

Endothelial cells

Not detected  

Glial cells

Not detected  

Neuronal cells

Medium  

Neuropil

Medium  
 
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

285.2

N/A Male, age 5
Sample 1
TPM: 340.9
overview Female, age 40
Sample 2
TPM: 102.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 412.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

229.4

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 241.2
Samples: 114

Max RPKM: 425
Min RPKM: 71.8
Std RPKM: 76.8
Median RPKM: 254.3
GTEX-X585-3026-SM-46MWF 425.0
GTEX-13NYC-2826-SM-5K7WR 410.7
GTEX-QVJO-1426-SM-2S1QY 387.9
GTEX-WL46-2926-SM-3LK82 366.1
GTEX-117XS-3026-SM-5N9CA 363.6
GTEX-131YS-3126-SM-5KLYT 344.1
GTEX-12ZZX-2926-SM-5GCOQ 341.4
GTEX-X4XX-3026-SM-3NMB2 339.3
GTEX-Z93S-2926-SM-57WB9 337.3
GTEX-ZYFD-3026-SM-5E44C 336.4
GTEX-14BMV-3026-SM-5S2PQ 334.5
GTEX-13FXS-3126-SM-5J2NN 329.2
GTEX-13SLX-3126-SM-5S2Q5 327.8
GTEX-XLM4-3026-SM-4AT6L 327.3
GTEX-1128S-2726-SM-5H12C 327.2
GTEX-12WSC-3026-SM-5GCNF 324.6
GTEX-YJ89-3026-SM-5IFJI 323.5
GTEX-TSE9-3026-SM-3DB76 322.8
GTEX-11DXW-1126-SM-5H12Q 316.2
GTEX-WWYW-3126-SM-3NB39 314.0
GTEX-14ASI-3026-SM-5S2PN 313.6
GTEX-13NYS-3126-SM-5KLYV 310.5
GTEX-T5JC-2426-SM-3NMDB 302.5
GTEX-1313W-3126-SM-5LZUI 298.4
GTEX-13O3Q-2926-SM-5KM45 295.2
GTEX-145LS-3126-SM-5Q5BY 294.2
GTEX-132Q8-3026-SM-5PNVG 291.3
GTEX-WVLH-3026-SM-3MJG9 289.2
GTEX-11ZUS-2926-SM-5FQSL 288.7
GTEX-12126-1026-SM-5P9JJ 288.2
GTEX-13OW6-3026-SM-5J2MI 287.9
GTEX-Y111-2726-SM-4TT3N 286.8
GTEX-NPJ8-1526-SM-2D7VU 285.3
GTEX-RNOR-2326-SM-2TF4I 284.6
GTEX-T6MN-2626-SM-32PMQ 284.0
GTEX-11DXY-3226-SM-5GIDE 282.0
GTEX-12ZZW-2926-SM-5LZUP 282.0
GTEX-12ZZY-3026-SM-5GCOU 281.8
GTEX-XOTO-3026-SM-4B65M 278.2
GTEX-145MH-3026-SM-5Q5DZ 277.8
GTEX-WHSE-3026-SM-3P5ZH 277.2
GTEX-11GSO-2926-SM-5HL73 277.0
GTEX-11PRG-2926-SM-5987A 276.0
GTEX-ZUA1-3026-SM-59HJC 275.5
GTEX-WZTO-2926-SM-3NM9I 274.8
GTEX-1192X-3126-SM-5N9BY 274.4
GTEX-13FLW-1426-SM-5K7YE 267.6
GTEX-145MG-3026-SM-5RQJA 267.5
GTEX-ZVT3-3026-SM-5E43N 266.7
GTEX-13FHO-3026-SM-5J1O9 261.6
GTEX-13QIC-2926-SM-5J2NF 261.1
GTEX-11NUK-2926-SM-5A5MD 259.7
GTEX-13VXU-2926-SM-5LU5C 259.2
GTEX-YFC4-3126-SM-5PNV6 256.6
GTEX-R55F-1326-SM-5S2V4 255.9
GTEX-145MF-2726-SM-5O995 255.4
GTEX-13OVH-3026-SM-5MR4N 254.6
GTEX-14A5I-2926-SM-5Q5CQ 254.0
GTEX-11ONC-2926-SM-5P9JM 252.1
GTEX-11EI6-3026-SM-5GZZO 248.0
GTEX-13O3O-3126-SM-5KM3H 247.3
GTEX-Q2AG-2926-SM-2HMJ3 246.2
GTEX-144GL-3026-SM-5Q5CW 245.1
GTEX-RU72-3026-SM-5SI7Y 243.3
GTEX-ZAK1-3026-SM-5S2MJ 242.0
GTEX-T2IS-3026-SM-32QPM 240.7
GTEX-12WSH-3026-SM-5CVNI 238.7
GTEX-13PL6-3126-SM-5LUAR 236.1
GTEX-PVOW-2526-SM-2XCF7 235.6
GTEX-13NYB-3026-SM-5IJD7 235.0
GTEX-Y8DK-0826-SM-4TT3T 230.2
GTEX-13OW8-2826-SM-5L3GC 228.9
GTEX-QMR6-1426-SM-32PLA 227.3
GTEX-ZZPT-3026-SM-5GZXH 221.3
GTEX-13S7M-3126-SM-5RQJQ 220.4
GTEX-1117F-3226-SM-5N9CT 218.0
GTEX-1399T-3026-SM-5KLZC 217.3
GTEX-11OC5-0726-SM-5P9JK 216.5
GTEX-13FHP-3026-SM-5IJBS 212.9
GTEX-NPJ7-2726-SM-2I3FT 210.4
GTEX-111FC-3126-SM-5GZZ2 198.6
GTEX-ZAJG-3126-SM-5HL9J 198.6
GTEX-11GS4-3126-SM-5A5LH 195.7
GTEX-131XW-3126-SM-5LZUC 188.2
GTEX-11NV4-2126-SM-5N9DS 186.7
GTEX-QVUS-2826-SM-3GADB 185.3
GTEX-11EMC-3226-SM-5EGKW 183.6
GTEX-13JUV-2926-SM-5LZX7 179.0
GTEX-12ZZZ-3026-SM-5BC67 178.3
GTEX-13X6K-2926-SM-5Q5D5 177.8
GTEX-QDT8-2926-SM-32PKC 176.8
GTEX-OXRN-2426-SM-2I5EQ 174.6
GTEX-UTHO-3026-SM-3GAFB 173.6
GTEX-11O72-2926-SM-5BC4V 165.4
GTEX-ZE7O-3126-SM-5HL5X 164.1
GTEX-12WSD-3126-SM-5HL7P 154.0
GTEX-13JVG-3126-SM-5L3FH 148.5
GTEX-11OF3-2926-SM-5HL78 147.6
GTEX-13X6J-3026-SM-5Q5CU 147.3
GTEX-139T8-1026-SM-5J2MC 142.4
GTEX-11WQK-3026-SM-5EQL6 138.6
GTEX-144FL-3026-SM-5O99C 136.7
GTEX-N7MT-1126-SM-5SI7V 124.1
GTEX-13OW7-3026-SM-5L3GY 117.5
GTEX-147GR-3026-SM-5S2ML 117.0
GTEX-13IVO-2926-SM-5L3CZ 115.7
GTEX-13PVQ-3026-SM-5SI93 103.7
GTEX-13OVJ-2826-SM-5L3GW 101.2
GTEX-13G51-3026-SM-5IJB8 93.6
GTEX-11GSP-3226-SM-5986O 90.8
GTEX-1445S-3026-SM-5O9BR 77.8
GTEX-12WSA-2926-SM-5EQ4D 76.5
GTEX-11TTK-2926-SM-5PNYP 75.2
GTEX-PWO3-0926-SM-2I5EY 71.8
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 217.0
Samples: 108

Max RPKM: 421.2
Min RPKM: 51.8
Std RPKM: 84.2
Median RPKM: 228.7
GTEX-X585-0011-R10A-SM-46MUY 421.2
GTEX-X4XX-0011-R10B-SM-46MWO 392.1
GTEX-ZF28-0011-R10a-SM-4WWEH 353.4
GTEX-XLM4-0011-R10A-SM-4AT5P 346.2
GTEX-NL3H-0011-R10A-SM-2I3E9 342.6
GTEX-NPJ8-0011-R10A-SM-2YUMO 334.8
GTEX-13NYS-0011-R10a-SM-5MR4S 327.3
GTEX-Q2AG-0011-R10A-SM-2HMLA 324.8
GTEX-12WSF-0011-R10a-SM-5LZVH 324.4
GTEX-QVJO-0011-R10A-SM-2S1QJ 321.0
GTEX-13S7M-0011-R10b-SM-5PNZB 320.4
GTEX-12ZZX-0011-R10b-SM-5DUWK 317.9
GTEX-13X6K-0011-R10a-SM-5P9JR 316.1
GTEX-12WSE-0011-R10b-SM-5P9JV 311.9
GTEX-14ASI-0011-R10b-SM-5S2VZ 311.9
GTEX-13O3Q-0011-R10b-SM-5KM39 308.2
GTEX-145MG-0011-R10a-SM-5PNWG 306.6
GTEX-12ZZY-0011-R10b-SM-5HL7W 303.9
GTEX-131XH-0011-R10a-SM-5EGLJ 299.7
GTEX-X4EP-0011-R10B-SM-4QASJ 299.0
GTEX-131YS-0011-R10b-SM-5EQ5N 296.9
GTEX-13CZV-0011-R10b-SM-5LZYD 291.4
GTEX-14BIL-0011-R10a-SM-5SI75 291.0
GTEX-T5JC-0011-R10A-SM-32PM2 289.1
GTEX-1313W-0011-R10b-SM-5DUXA 284.7
GTEX-Y8DK-0011-R10A-SM-4SOK1 283.9
GTEX-WL46-0011-R10A-SM-3MJFQ 283.3
GTEX-13N1W-0011-R10b-SM-5MR4H 280.6
GTEX-145LS-0011-R10a-SM-5PNUQ 275.6
GTEX-WZTO-0011-R10B-SM-4E3KB 273.3
GTEX-YJ89-0011-R10a-SM-4SOK9 272.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC 269.8
GTEX-132Q8-0011-R10b-SM-5DUWZ 268.4
GTEX-14BIN-0011-R10a-SM-5S2UA 267.6
GTEX-12WSM-0011-R10a-SM-5DUWV 265.8
GTEX-13OW7-0011-R10a-SM-5L3H3 265.4
GTEX-NPJ7-0011-R10A-SM-2I3E5 262.2
GTEX-T6MN-0011-R10A-SM-32QP7 258.2
GTEX-13FHO-0011-R10b-SM-5J2MM 256.1
GTEX-13OW6-0011-R10a-SM-5L3HE 256.0
GTEX-13QJC-0011-R10a-SM-5SI63 252.3
GTEX-N7MS-0011-R10A-SM-2HMJK 252.3
GTEX-12WSH-0011-R10a-SM-5LZUS 251.6
GTEX-145MH-0011-R10b-SM-5PNUK 248.0
GTEX-13RTJ-0011-R10b-SM-5O9CW 245.2
GTEX-12WSC-0011-R10a-SM-5GU57 245.1
GTEX-13QIC-0011-R10a-SM-5O9C7 244.2
GTEX-S7SE-0011-R10A-SM-2XCDF 243.4
GTEX-YFC4-0011-R10a-SM-4SOK5 242.8
GTEX-WVLH-0011-R10A-SM-3MJFM 242.4
GTEX-147GR-0011-R10b-SM-5S2UM 231.9
GTEX-ZAB4-0011-R10a-SM-4SOKH 230.4
GTEX-13X6J-0011-R10b-SM-5PNWA 229.8
GTEX-13SLX-0011-R10a-SM-5P9HV 228.9
GTEX-11H98-0011-R10b-SM-5NQ98 228.5
GTEX-13FXS-0011-R10a-SM-5J2MA 228.4
GTEX-Z93S-0011-R10a-SM-4RGNM 225.5
GTEX-ZVT3-0011-R10b-SM-57WB6 225.0
GTEX-N7MT-0011-R10A-SM-2I3E1 222.7
GTEX-13OVL-0011-R10a-SM-5L3GS 216.4
GTEX-13X6I-0011-R10a-SM-5PNWI 215.6
GTEX-13FLW-0011-R10b-SM-5LZZF 208.9
GTEX-ZVZQ-0011-R10b-SM-51MRT 205.8
GTEX-13SLW-0011-R10a-SM-5S2UI 202.2
GTEX-WWYW-0011-R10A-SM-3NB35 202.2
GTEX-TSE9-0011-R10A-SM-3DB7O 198.0
GTEX-13FTZ-0011-R10b-SM-5KLZS 196.2
GTEX-ZDXO-0011-R10a-SM-4WWD8 188.9
GTEX-13O3O-0011-R10a-SM-5LUA9 186.3
GTEX-QDT8-0011-R10A-SM-32PKG 185.0
GTEX-13G51-0011-R10b-SM-5LZYF 184.8
GTEX-13OW8-0011-R10a-SM-5L3H6 181.5
GTEX-NL4W-0011-R10A-SM-2I3DY 178.7
GTEX-QMR6-0011-R10A-SM-32PKO 176.3
GTEX-13JUV-0011-R10b-SM-5LZXR 175.2
GTEX-147F4-0011-R10b-SM-5S2WC 172.3
GTEX-145LU-0011-R10a-SM-5PNWJ 170.0
GTEX-13NYB-0011-R10a-SM-5KM43 169.6
GTEX-12126-0011-R10b-SM-5BC6T 168.5
GTEX-13FLV-0011-R10b-SM-5LZZ2 162.3
GTEX-OXRN-0011-R10A-SM-2I5GC 160.4
GTEX-11WQC-0011-R10a-SM-57WCT 158.3
GTEX-139TS-0011-R10a-SM-5K7TU 154.8
GTEX-ZXG5-0011-R10a-SM-57WDD 144.9
GTEX-X261-0011-R10B-SM-4E3JT 141.2
GTEX-RVPU-0011-R10A-SM-2XCAH 136.7
GTEX-QVUS-0011-R10A-SM-3GIK3 136.3
GTEX-12ZZW-0011-R10b-SM-5HL9X 132.1
GTEX-P44H-0011-R10A-SM-2XCEK 131.0
GTEX-ZUA1-0011-R10a-SM-51MT6 129.5
GTEX-13NZA-0011-R10b-SM-5KM54 124.7
GTEX-11ZUS-0011-R10b-SM-5BC79 108.4
GTEX-13IVO-0011-R10a-SM-5LZY3 104.8
GTEX-11WQK-0011-R10a-SM-5BC6R 104.6
GTEX-XMD1-0011-R10A-SM-4AT4A 94.9
GTEX-1477Z-0011-R10b-SM-5S2RF 93.1
GTEX-12WSD-0011-R10b-SM-5GU79 91.5
GTEX-11GSP-0011-R10a-SM-5NQ7J 84.0
GTEX-13OVJ-0011-R10b-SM-5L3HT 82.5
GTEX-12WSA-0011-R10b-SM-5P9ET 81.4
GTEX-13N2G-0011-R10a-SM-5MR34 79.6
GTEX-14753-0011-R10b-SM-5S2WE 78.9
GTEX-OXRO-0011-R10A-SM-2I5EH 63.2
GTEX-131XW-0011-R10a-SM-5DUVA 58.3
GTEX-ZV68-0011-R10a-SM-51MT7 57.4
GTEX-1445S-0011-R10a-SM-5PNWB 57.2
GTEX-13JVG-0011-R10b-SM-5KM2P 53.4
GTEX-ZE7O-0011-R10a-SM-57WAZ 51.8
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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