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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:84.9TPM
GTEx:28.8RPKM
FANTOM5:116.5Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA002317

 

Glandular cells

Medium  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

84.9

overview Male, age 65
Sample 1
TPM: 15.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 158.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 91.9
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 73.6

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

28.8

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 28.8
Samples: 88

Max RPKM: 89.5
Min RPKM: 3.1
Std RPKM: 19.7
Median RPKM: 21.7
GTEX-ZVZP-1826-SM-5GZXB 89.5
GTEX-ZZ64-0526-SM-5GZXM 80.3
GTEX-13FTW-2026-SM-5IJE2 79.9
GTEX-ZVT2-2126-SM-5NQ93 78.8
GTEX-ZTX8-0526-SM-59HLD 73.5
GTEX-1399S-2026-SM-5KM4B 66.8
GTEX-ZYFG-2026-SM-5E43Y 60.7
GTEX-14DAR-1426-SM-5RQIR 55.6
GTEX-13CF3-1226-SM-5LZXN 55.6
GTEX-XAJ8-0526-SM-47JYK 54.2
GTEX-14E6E-1626-SM-5RQI7 52.1
GTEX-ZA64-1226-SM-5HL7B 51.0
GTEX-111YS-1426-SM-5GID8 50.4
GTEX-1399U-2126-SM-5IFEZ 49.0
GTEX-13D11-0726-SM-5LZZB 48.3
GTEX-ZVP2-1726-SM-5GU5P 47.9
GTEX-WFJO-0926-SM-4LVM2 46.3
GTEX-13PL7-2626-SM-5IFH4 45.5
GTEX-13FH7-1226-SM-5IJFK 44.6
GTEX-UPK5-2026-SM-4JBIM 42.2
GTEX-11DXX-1626-SM-5H11H 42.2
GTEX-XXEK-1026-SM-4BRUW 40.2
GTEX-Z9EW-0926-SM-5CVMM 39.6
GTEX-ZYWO-1526-SM-5SIAL 39.3
GTEX-11P7K-1626-SM-5GU63 39.3
GTEX-1122O-1326-SM-5H11F 38.1
GTEX-XBED-1426-SM-4AT4G 37.8
GTEX-ZC5H-2326-SM-4WAYT 36.5
GTEX-Y9LG-1626-SM-5IFHM 35.4
GTEX-ZPIC-2326-SM-57WDW 34.0
GTEX-X15G-1426-SM-4PQZK 32.1
GTEX-11EQ9-1326-SM-5985X 31.9
GTEX-X5EB-1626-SM-4E3IV 31.4
GTEX-11NSD-1726-SM-5N9C3 30.4
GTEX-1399R-2026-SM-5K7WN 29.3
GTEX-11I78-1126-SM-5A5K5 27.7
GTEX-11XUK-1426-SM-5EQMG 27.4
GTEX-VUSG-1726-SM-4KKZL 27.0
GTEX-131XG-1726-SM-5LZUR 26.4
GTEX-ZPCL-1726-SM-57WEO 25.3
GTEX-ZLFU-1526-SM-4WWBT 24.7
GTEX-ZXES-1526-SM-5NQ95 23.1
GTEX-YEC4-1726-SM-4W21E 22.5
GTEX-11P82-0826-SM-5P9GU 22.2
GTEX-12BJ1-1926-SM-5HL9Z 21.3
GTEX-YF7O-1826-SM-5IFIU 21.2
GTEX-WRHK-1026-SM-4MVOD 20.8
GTEX-ZTSS-0926-SM-59865 20.4
GTEX-131XF-1326-SM-5GCMQ 20.0
GTEX-13RTK-0826-SM-5Q5C6 19.9
GTEX-ZLV1-1126-SM-4WWBW 19.6
GTEX-ZEX8-1826-SM-57WBH 19.1
GTEX-145LT-1026-SM-5LU9O 19.0
GTEX-139T6-1026-SM-5IJGC 18.8
GTEX-WQUQ-2426-SM-4MVNW 18.1
GTEX-13O61-1326-SM-5KM31 17.9
GTEX-13113-1226-SM-5EGHT 17.8
GTEX-ZP4G-1626-SM-57WGD 17.2
GTEX-133LE-1426-SM-5IFH1 17.1
GTEX-XGQ4-1326-SM-4GIDU 16.2
GTEX-XUZC-1426-SM-4BRV3 16.0
GTEX-WFG7-1726-SM-4LVME 15.8
GTEX-YB5E-1526-SM-5IFIE 15.5
GTEX-139YR-2226-SM-5IFFW 15.4
GTEX-11VI4-1626-SM-5EQKO 15.2
GTEX-ZTPG-2626-SM-57WFX 15.2
GTEX-13QBU-1926-SM-5IJEW 15.2
GTEX-WH7G-1626-SM-4LVMY 14.9
GTEX-11DXZ-1326-SM-5H11X 14.9
GTEX-145ME-0926-SM-5O9AR 14.7
GTEX-Y114-1426-SM-4TT6W 14.6
GTEX-148VJ-2226-SM-5NQ9M 12.7
GTEX-ZQG8-2526-SM-57WEQ 11.4
GTEX-13O21-1026-SM-5IJDU 10.3
GTEX-ZQUD-0926-SM-57WE3 9.2
GTEX-1192X-2526-SM-59868 9.0
GTEX-WFG8-1626-SM-4LVMB 8.7
GTEX-Y5LM-1626-SM-4VDTB 8.3
GTEX-13111-1426-SM-5DUW3 8.2
GTEX-VJYA-0926-SM-4KL1N 6.9
GTEX-WEY5-1526-SM-4LMJF 6.7
GTEX-12WSK-1526-SM-5CVNO 6.0
GTEX-111CU-1326-SM-5NQ8L 5.6
GTEX-ZF2S-1726-SM-57WFT 5.6
GTEX-117YX-0326-SM-5GICL 5.5
GTEX-Y3IK-1726-SM-4YCCR 5.2
GTEX-XMK1-1826-SM-4B66F 4.7
GTEX-13OVI-1926-SM-5IJCG 3.1
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

116.5

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 116.5
FF:10024-101D6 15,40,85 years, mixed 116.5

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