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TOMM34
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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:42.3RPKM
FANTOM5:66.7Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Low
 

Antibody staining

Antibody HPA018845

 

Antibody HPA056875

 

Glial cells

Not detected   Not detected  

Neuronal cells

Low   Not detected  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

42.3

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 42.3
Samples: 117

Max RPKM: 95.5
Min RPKM: 5.8
Std RPKM: 22.6
Median RPKM: 43.7
GTEX-13G51-0011-R5a-SM-5L3EB 95.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 87.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 87.1
GTEX-T6MN-0011-R5A-SM-32QPD 86.4
GTEX-T5JC-0011-R5A-SM-32PLK 83.5
GTEX-131YS-0011-R5b-SM-5K7YB 82.1
GTEX-11OF3-0011-R5a-SM-57WB4 79.7
GTEX-13X6K-0011-R5b-SM-5PNUE 76.1
GTEX-QVJO-0011-R5A-SM-2S1QM 74.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 74.7
GTEX-12WSC-0011-R5b-SM-5CVNS 73.1
GTEX-T2IS-0011-R5A-SM-32QP4 72.8
GTEX-WHSE-0011-R5A-SM-3P5ZO 72.8
GTEX-UTHO-0011-R5A-SM-3GIJD 72.6
GTEX-1313W-0011-R5b-SM-5L3EP 71.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 70.9
GTEX-12WSF-0011-R5a-SM-5HL8K 69.8
GTEX-14BIM-0011-R5b-SM-5S2RM 69.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 67.8
GTEX-1399T-0011-R5b-SM-5IJDK 67.6
GTEX-S7SE-0011-R5A-SM-2XCDA 64.4
GTEX-WL46-0011-R5A-SM-3LK6V 62.7
GTEX-14ABY-0011-R5b-SM-5SI7B 62.6
GTEX-P44H-0011-R5A-SM-2XCEX 62.4
GTEX-145MH-0011-R5a-SM-5P9JT 61.5
GTEX-13VXU-0011-R5a-SM-5O9D7 60.7
GTEX-13X6J-0011-R5b-SM-5PNWT 60.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60.1
GTEX-RU72-0011-R5A-SM-2TF6U 58.7
GTEX-ZUA1-0011-R5b-SM-51MTG 57.7
GTEX-WVLH-0011-R5A-SM-3MJFW 57.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 56.8
GTEX-132Q8-0011-R5a-SM-5IJDM 56.6
GTEX-13SLX-0011-R5a-SM-5O9BV 56.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 56.2
GTEX-WWYW-0011-R5A-SM-3NB3E 56.0
GTEX-11GSP-0011-R5a-SM-57WBE 55.4
GTEX-N7MT-0011-R5a-SM-2I3G6 54.9
GTEX-RVPU-0011-R5A-SM-2XCAD 53.9
GTEX-X585-0011-R5A-SM-46MVI 53.8
GTEX-WZTO-0011-R5B-SM-3NMC5 53.5
GTEX-145LS-0011-R5a-SM-5SI65 52.8
GTEX-13JUV-0011-R5a-SM-5LZY5 52.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 51.5
GTEX-11H98-0011-R5b-SM-57WCF 50.9
GTEX-N7MS-0011-R5a-SM-2HMK8 50.5
GTEX-PVOW-0011-R5A-SM-32PL7 50.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 50.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 49.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 49.0
GTEX-R55E-0011-R5A-SM-2TC5N 48.7
GTEX-13CZV-0011-R5a-SM-5K7XA 48.1
GTEX-13FLW-0011-R5a-SM-5LZX6 46.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 45.8
GTEX-13NYS-0011-R5a-SM-5MR4D 45.0
GTEX-13O3O-0011-R5b-SM-5KM44 44.4
GTEX-13OVL-0011-R5b-SM-5L3FU 43.8
GTEX-ZE7O-0011-R5a-SM-57WBO 43.8
GTEX-139TT-0011-R5b-SM-5K7W8 43.7
GTEX-11NV4-0011-R5a-SM-5NQ88 43.6
GTEX-13OW6-0011-R5a-SM-5O9BK 43.0
GTEX-13X6I-0011-R5a-SM-5PNWW 42.9
GTEX-13FXS-0011-R5b-SM-5LZYE 42.7
GTEX-Z93S-0011-R5b-SM-4RGNI 41.2
GTEX-13S7M-0011-R5b-SM-5P9HS 37.4
GTEX-13OW5-0011-R5b-SM-5L3FR 36.0
GTEX-13OW7-0011-R5b-SM-5O9DM 35.3
GTEX-12WSD-0011-R5b-SM-5CVNG 35.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 35.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 35.0
GTEX-12WSB-0011-R5b-SM-5GU67 34.8
GTEX-RVPV-0011-R5A-SM-2TF69 34.2
GTEX-XMD1-0011-R5A-SM-4AT47 34.1
GTEX-NL4W-0011-R5a-SM-2I3GD 33.2
GTEX-OHPN-0011-R5A-SM-2I5FF 32.5
GTEX-ZXG5-0011-R5b-SM-57WBN 29.4
GTEX-13NYB-0011-R5a-SM-5MR45 29.1
GTEX-13CIG-0011-R5b-SM-5L3F2 28.9
GTEX-YFC4-0011-R5a-SM-4RGLR 28.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 27.3
GTEX-13FLV-0011-R5a-SM-5LZWT 26.6
GTEX-14BIN-0011-R5b-SM-5SI78 26.5
GTEX-OXRN-0011-R5A-SM-2I5EF 26.1
GTEX-NL3H-0011-R5a-SM-2I3GB 24.6
GTEX-XOTO-0011-R5A-SM-4B657 24.4
GTEX-13OVH-0011-R5b-SM-5KM4L 24.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 23.9
GTEX-QMR6-0011-R5A-SM-32PKT 20.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 20.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 19.2
GTEX-13JVG-0011-R5a-SM-5MR4O 19.0
GTEX-12ZZX-0011-R5a-SM-5HL89 18.2
GTEX-144GO-0011-R5a-SM-5PNUR 17.8
GTEX-YJ89-0011-R5a-SM-4V6GM 17.6
GTEX-X4XX-0011-R5A-SM-46MWN 17.1
GTEX-12WSH-0011-R5b-SM-5P9F3 16.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 16.8
GTEX-ZV68-0011-R5a-SM-4YCDW 15.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 15.3
GTEX-NPJ7-0011-R5a-SM-33HBK 15.0
GTEX-11WQC-0011-R5a-SM-5BC74 14.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 14.0
GTEX-X261-0011-R5A-SM-3NMB4 14.0
GTEX-ZVT3-0011-R5a-SM-51MSI 13.7
GTEX-139T8-0011-R5b-SM-5J1MO 13.4
GTEX-12WSA-0011-R5b-SM-5GU5I 13.0
GTEX-139TS-0011-R5b-SM-5J2MZ 12.1
GTEX-13112-0011-R5b-SM-5DUV8 11.5
GTEX-144GL-0011-R5b-SM-5PNUJ 10.9
GTEX-1445S-0011-R5a-SM-5PNUS 10.2
GTEX-13FHP-0011-R5b-SM-5LZY2 8.9
GTEX-1477Z-0011-R5b-SM-5PNUO 8.9
GTEX-S7PM-0011-R5A-SM-3NM8G 7.8
GTEX-13CF2-0011-R5a-SM-5LZWS 7.1
GTEX-11UD1-0011-R5b-SM-5P9FP 6.7
GTEX-13NZA-0011-R5b-SM-5KM4K 5.9
GTEX-145MG-0011-R5b-SM-5S2VU 5.8
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

66.7

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 66.7
FF:10379-105H1 89 years, female 77.1
FF:10164-103B2 76 years, female 56.3

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