We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
TOMM34
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:12.5TPM
GTEx:11.2RPKM
FANTOM5:13.4Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA018845

 

Antibody HPA056875

 

Glandular cells

Medium   Not detected  
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

12.5

overview Male, age 65
Sample 1
TPM: 9.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 12.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 13.9
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 14.3

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

11.2

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 11.2
Samples: 88

Max RPKM: 21.3
Min RPKM: 5.5
Std RPKM: 3
Median RPKM: 10.5
GTEX-Y5LM-1626-SM-4VDTB 21.3
GTEX-13O61-1326-SM-5KM31 20.0
GTEX-UPK5-2026-SM-4JBIM 17.8
GTEX-WRHK-1026-SM-4MVOD 17.7
GTEX-VUSG-1726-SM-4KKZL 17.5
GTEX-131XG-1726-SM-5LZUR 16.4
GTEX-11NSD-1726-SM-5N9C3 15.8
GTEX-148VJ-2226-SM-5NQ9M 15.7
GTEX-WFG8-1626-SM-4LVMB 15.3
GTEX-ZC5H-2326-SM-4WAYT 15.2
GTEX-WH7G-1626-SM-4LVMY 15.1
GTEX-ZEX8-1826-SM-57WBH 14.7
GTEX-11P82-0826-SM-5P9GU 14.7
GTEX-WFJO-0926-SM-4LVM2 14.5
GTEX-XGQ4-1326-SM-4GIDU 14.0
GTEX-13RTK-0826-SM-5Q5C6 13.6
GTEX-ZLFU-1526-SM-4WWBT 13.3
GTEX-133LE-1426-SM-5IFH1 13.1
GTEX-1399U-2126-SM-5IFEZ 13.1
GTEX-14E6E-1626-SM-5RQI7 13.0
GTEX-X15G-1426-SM-4PQZK 13.0
GTEX-13QBU-1926-SM-5IJEW 12.9
GTEX-11VI4-1626-SM-5EQKO 12.9
GTEX-139YR-2226-SM-5IFFW 12.8
GTEX-ZZ64-0526-SM-5GZXM 12.7
GTEX-1399R-2026-SM-5K7WN 12.6
GTEX-XUZC-1426-SM-4BRV3 12.5
GTEX-XAJ8-0526-SM-47JYK 12.4
GTEX-131XF-1326-SM-5GCMQ 12.3
GTEX-12BJ1-1926-SM-5HL9Z 12.3
GTEX-ZP4G-1626-SM-57WGD 12.2
GTEX-WQUQ-2426-SM-4MVNW 11.9
GTEX-ZTPG-2626-SM-57WFX 11.9
GTEX-ZYWO-1526-SM-5SIAL 11.8
GTEX-145ME-0926-SM-5O9AR 11.8
GTEX-Z9EW-0926-SM-5CVMM 11.7
GTEX-Y3IK-1726-SM-4YCCR 11.4
GTEX-WEY5-1526-SM-4LMJF 11.4
GTEX-11XUK-1426-SM-5EQMG 11.4
GTEX-13FTW-2026-SM-5IJE2 11.4
GTEX-ZVP2-1726-SM-5GU5P 11.3
GTEX-145LT-1026-SM-5LU9O 11.2
GTEX-14DAR-1426-SM-5RQIR 10.7
GTEX-XXEK-1026-SM-4BRUW 10.5
GTEX-ZXES-1526-SM-5NQ95 10.5
GTEX-13113-1226-SM-5EGHT 10.5
GTEX-11DXZ-1326-SM-5H11X 10.2
GTEX-139T6-1026-SM-5IJGC 10.2
GTEX-1122O-1326-SM-5H11F 10.1
GTEX-ZTX8-0526-SM-59HLD 9.9
GTEX-YEC4-1726-SM-4W21E 9.9
GTEX-ZYFG-2026-SM-5E43Y 9.9
GTEX-ZVT2-2126-SM-5NQ93 9.8
GTEX-VJYA-0926-SM-4KL1N 9.8
GTEX-13FH7-1226-SM-5IJFK 9.8
GTEX-13CF3-1226-SM-5LZXN 9.8
GTEX-1399S-2026-SM-5KM4B 9.7
GTEX-13O21-1026-SM-5IJDU 9.6
GTEX-1192X-2526-SM-59868 9.6
GTEX-ZLV1-1126-SM-4WWBW 9.6
GTEX-ZVZP-1826-SM-5GZXB 9.5
GTEX-11DXX-1626-SM-5H11H 9.4
GTEX-XBED-1426-SM-4AT4G 9.3
GTEX-YF7O-1826-SM-5IFIU 9.3
GTEX-117YX-0326-SM-5GICL 9.2
GTEX-13D11-0726-SM-5LZZB 9.1
GTEX-YB5E-1526-SM-5IFIE 9.0
GTEX-11I78-1126-SM-5A5K5 9.0
GTEX-WFG7-1726-SM-4LVME 8.9
GTEX-11EQ9-1326-SM-5985X 8.7
GTEX-Y114-1426-SM-4TT6W 8.7
GTEX-ZTSS-0926-SM-59865 8.7
GTEX-X5EB-1626-SM-4E3IV 8.6
GTEX-13111-1426-SM-5DUW3 8.6
GTEX-Y9LG-1626-SM-5IFHM 8.4
GTEX-ZQG8-2526-SM-57WEQ 8.4
GTEX-ZQUD-0926-SM-57WE3 8.2
GTEX-ZA64-1226-SM-5HL7B 8.2
GTEX-ZPCL-1726-SM-57WEO 8.1
GTEX-11P7K-1626-SM-5GU63 8.1
GTEX-ZPIC-2326-SM-57WDW 7.9
GTEX-12WSK-1526-SM-5CVNO 7.7
GTEX-XMK1-1826-SM-4B66F 7.7
GTEX-ZF2S-1726-SM-57WFT 7.7
GTEX-111CU-1326-SM-5NQ8L 7.5
GTEX-13OVI-1926-SM-5IJCG 7.4
GTEX-13PL7-2626-SM-5IFH4 5.6
GTEX-111YS-1426-SM-5GID8 5.5
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

13.4

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 13.4
FF:10024-101D6 15,40,85 years, mixed 13.4

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.